C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MIS18 kinetochore protein homolog A (S. pombe)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022978 Mis18a 10090 - 16:90719312-90727404 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000099554 Mis18a-001 90719312-90727404 protein_coding
  ENSMUST00000129171 Mis18a-002 90719312-90727404 retained_intron
  ENSMUST00000147546 Mis18a-003 90721447-90727139 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099554ENSMUST00000129171ENSMUST00000147546
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099554 3.452±0.77 2.760±1.08 5.267±1.66 7.010±5.30 3.277±1.60 5.870±1.43 0.934±0.28 2.075±0.29 12.179±12.40 4.135±0.68 0.594±0.24 9.204±4.07 12.786±9.93 7.675±3.70
ENSMUST00000129171 0.380±0.03 0.212±0.08 0.648±0.37 0.625±0.42 0.296±0.12 0.506±0.09 0.159±0.03 N/A 1.571±0.93 0.464±0.10 0.081±0.03 0.756±0.30 0.340±0.04 0.676±0.04
ENSMUST00000147546 N/A N/A N/A 1.291±0.00 1.737±0.40 2.185±0.62 1.000±0.39 0.801±0.00 0.735±0.23 N/A 0.402±0.04 4.798±2.04 10.118±4.86 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F2 CIL_0001F2_0002 CGP 16:90386397-90727404
CIL_0001I6 CIL_0001I6_0002 CGP 16:90719312-90749785

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IDA chromosome, centromeric region
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007059 IMP chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0034080 IMP CENP-A containing nucleosome assembly
GO:0044030 IMP regulation of DNA methylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000035333 mis18a MIS18 kinetochore protein homolog A (S. pombe) protein_coding Danio_rerio
ENSG00000159055 MIS18A MIS18 kinetochore protein A protein_coding Homo_sapiens

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