C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001F2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142149-ENSG00000159055 CGP 9606 21:31873315-32279069
GeneTranscriptPositionBiotype
ENSG00000142149 (HUNK)
hormonally up-regulated Neu-associated kinase 		ENST00000270112 (HUNK-001) 31873315-32004064 protein_coding
ENST00000430354 (HUNK-002) 31924552-31968334 protein_coding
ENST00000439107 (HUNK-004) 31974703-32044633 protein_coding
ENST00000465574 (HUNK-003) 31974178-31995927 processed_transcript
ENSG00000159055 (MIS18A)
MIS18 kinetochore protein A 		ENST00000290130 (MIS18A-001) 32268219-32279069 protein_coding
ENST00000486363 (MIS18A-002) 32269608-32270578 processed_transcript
ENSG00000227256 (MIS18A-AS1)
MIS18A antisense RNA 1 		ENST00000453549 (MIS18A-AS1-001) 32277863-32280988 antisense
ENSG00000230323 (LINC00159)
long intergenic non-protein coding RNA 159 		ENST00000411605 (LINC00159-002) 32080316-32086295 lincRNA
ENST00000414877 (LINC00159-001) 32080316-32197813 lincRNA
ENSG00000237138 (HUNK-AS1)
HUNK antisense RNA 1 		ENST00000437109 (HUNK-AS1-001) 32020966-32021782 antisense
ENSG00000261610 (AP000265.1)
 ENST00000565959 (AP000265.1-001) 32259804-32261585 lincRNA
CIL_0001F2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000053414-ENSMUSG00000022978 CGP 10090 16:90386397-90727404
GeneTranscriptPositionBiotype
ENSMUSG00000022978 (Mis18a)
MIS18 kinetochore protein homolog A (S. pombe) 		ENSMUST00000099554 (Mis18a-001) 90719312-90727404 protein_coding
ENSMUST00000129171 (Mis18a-002) 90719312-90727404 retained_intron
ENSMUST00000147546 (Mis18a-003) 90721447-90727139 retained_intron
ENSMUSG00000046119 (1110008E08Rik)
RIKEN cDNA 1110008E08 gene 		ENSMUST00000060246 (1110008E08Rik-201) 90554164-90554884 lincRNA
ENSMUST00000183621 (1110008E08Rik-001) 90554164-90554886 lincRNA
ENSMUSG00000053414 (Hunk)
hormonally upregulated Neu-associated kinase 		ENSMUST00000065856 (Hunk-201) 90386397-90499553 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001F2_0001ENSG00000142149ENST00000270112ENST00000430354ENST00000439107ENST00000465574ENSG00000159055ENST00000290130ENST00000486363ENSG00000227256ENST00000453549ENSG00000230323ENST00000411605ENST00000414877ENSG00000237138ENST00000437109ENSG00000261610ENST00000565959CIL_0001F2_0002ENSMUSG00000022978ENSMUST00000099554ENSMUST00000129171ENSMUST00000147546ENSMUSG00000046119ENSMUST00000060246ENSMUST00000183621ENSMUSG00000053414ENSMUST00000065856
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001F2_0001ENSG00000142149ENST00000270112ENST00000430354ENST00000439107ENST00000465574ENSG00000159055ENST00000290130ENST00000486363ENSG00000227256ENST00000453549ENSG00000230323ENST00000411605ENST00000414877ENSG00000237138ENST00000437109ENSG00000261610ENST00000565959CIL_0001F2_0002ENSMUSG00000022978ENSMUST00000099554ENSMUST00000129171ENSMUST00000147546ENSMUSG00000046119ENSMUST00000060246ENSMUST00000183621ENSMUSG00000053414ENSMUST00000065856
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142149 ENST00000270112 N/A 0.271±0.00 0.639±0.00 1.303±0.19 0.353±0.29 0.550±0.14 0.017±0.00 2.236±0.00 0.319±0.16 0.222±0.17 N/A 0.428±0.14 1.888±0.89 0.582±0.00
ENST00000430354 N/A N/A N/A N/A 1.738±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439107 N/A N/A N/A N/A N/A N/A N/A 0.363±0.00 N/A 0.431±0.00 N/A N/A N/A N/A
ENST00000465574 N/A N/A N/A N/A N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000159055 ENST00000290130 1.991±0.00 3.413±0.00 0.184±0.00 0.816±0.21 1.328±0.90 1.350±0.57 0.484±0.40 1.112±0.77 0.750±0.12 0.296±0.13 0.094±0.07 7.680±4.54 4.155±0.95 10.885±0.56
ENST00000486363 N/A N/A 0.283±0.00 N/A 2.314±0.00 2.843±0.00 N/A 1.207±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000227256 ENST00000453549 0.034±0.00 0.084±0.00 0.089±0.00 0.176±0.00 0.115±0.10 0.451±0.00 N/A 0.033±0.00 0.160±0.00 0.125±0.00 N/A 0.108±0.00 N/A 0.274±0.21
ENSG00000230323 ENST00000411605 N/A N/A N/A N/A 0.035±0.00 N/A 0.031±0.00 N/A N/A N/A N/A N/A N/A 0.113±0.00
ENST00000414877 N/A 0.034±0.00 N/A N/A N/A N/A 0.031±0.00 N/A N/A N/A N/A 0.056±0.00 N/A 0.406±0.33
ENSG00000237138 ENST00000437109 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.585±0.00 N/A N/A N/A 0.085±0.00
ENSG00000261610 ENST00000565959 0.097±0.00 0.188±0.00 N/A 0.054±0.02 0.085±0.00 0.026±0.00 0.045±0.00 0.092±0.00 0.031±0.00 0.018±0.00 0.006±0.00 0.045±0.03 0.027±0.00 0.154±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022978 ENSMUST00000099554 3.452±0.77 2.760±1.08 5.267±1.66 7.010±5.30 3.277±1.60 5.870±1.43 0.934±0.28 2.075±0.29 12.179±12.40 4.135±0.68 0.594±0.24 9.204±4.07 12.786±9.93 7.675±3.70
ENSMUST00000129171 0.380±0.03 0.212±0.08 0.648±0.37 0.625±0.42 0.296±0.12 0.506±0.09 0.159±0.03 N/A 1.571±0.93 0.464±0.10 0.081±0.03 0.756±0.30 0.340±0.04 0.676±0.04
ENSMUST00000147546 N/A N/A N/A 1.291±0.00 1.737±0.40 2.185±0.62 1.000±0.39 0.801±0.00 0.735±0.23 N/A 0.402±0.04 4.798±2.04 10.118±4.86 N/A
ENSMUSG00000046119 ENSMUST00000060246 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.027±0.00 0.075±0.00
ENSMUST00000183621 N/A N/A N/A N/A N/A N/A N/A N/A 0.008±0.00 N/A N/A N/A 0.027±0.00 0.018±0.00
ENSMUSG00000053414 ENSMUST00000065856 1.121±0.96 1.378±0.15 1.648±0.04 6.423±1.69 0.437±0.09 3.552±0.65 0.191±0.08 0.901±0.31 0.563±0.34 1.535±0.86 0.117±0.03 2.819±0.47 5.410±3.42 1.258±0.87

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