C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001I6_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000159055-ENSG00000170262 CGP 9606 21:32268219-32314784
GeneTranscriptPositionBiotype
ENSG00000142207 (URB1)
URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
ENST00000382751 (URB1-001) 32311018-32393026 protein_coding
ENST00000480196 (URB1-002) 32333113-32334334 retained_intron
ENST00000492603 (URB1-003) 32334209-32335630 processed_transcript
ENSG00000159055 (MIS18A)
MIS18 kinetochore protein A
ENST00000290130 (MIS18A-001) 32268219-32279069 protein_coding
ENST00000486363 (MIS18A-002) 32269608-32270578 processed_transcript
ENSG00000227256 (MIS18A-AS1)
MIS18A antisense RNA 1
ENST00000453549 (MIS18A-AS1-001) 32277863-32280988 antisense
CIL_0001I6_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022978-ENSMUSG00000039956 CGP 10090 16:90719312-90749785
GeneTranscriptPositionBiotype
ENSMUSG00000022978 (Mis18a)
MIS18 kinetochore protein homolog A (S. pombe)
ENSMUST00000099554 (Mis18a-001) 90719312-90727404 protein_coding
ENSMUST00000129171 (Mis18a-002) 90719312-90727404 retained_intron
ENSMUST00000147546 (Mis18a-003) 90721447-90727139 retained_intron
ENSMUSG00000039956 (Mrap)
melanocortin 2 receptor accessory protein
ENSMUST00000038197 (Mrap-001) 90738324-90749785 protein_coding
ENSMUST00000125429 (Mrap-003) 90738324-90749785 processed_transcript
ENSMUST00000133973 (Mrap-004) 90738324-90746539 processed_transcript
ENSMUST00000138984 (Mrap-002) 90738324-90749296 processed_transcript
ENSMUSG00000097757 (Gm17518)
predicted gene, 17518
ENSMUST00000181232 (Gm17518-201) 90727512-90729120 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001I6_0001ENSG00000142207ENST00000382751ENST00000480196ENST00000492603ENSG00000159055ENST00000290130ENST00000486363ENSG00000227256ENST00000453549CIL_0001I6_0002ENSMUSG00000022978ENSMUST00000099554ENSMUST00000129171ENSMUST00000147546ENSMUSG00000039956ENSMUST00000038197ENSMUST00000125429ENSMUST00000133973ENSMUST00000138984ENSMUSG00000097757ENSMUST00000181232
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001I6_0001ENSG00000142207ENST00000382751ENSG00000159055ENST00000290130ENST00000486363ENSG00000227256ENST00000453549CIL_0001I6_0002ENSMUSG00000022978ENSMUST00000099554ENSMUST00000129171ENSMUST00000147546ENSMUSG00000039956ENSMUST00000038197ENSMUST00000125429ENSMUST00000133973ENSMUST00000138984ENSMUSG00000097757ENSMUST00000181232
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142207 ENST00000382751 3.152±0.00 3.013±0.00 N/A 1.972±1.24 3.967±2.08 1.405±1.05 1.682±1.11 1.653±0.66 1.116±0.28 2.003±0.00 3.004±2.25 7.365±2.12 1.985±0.70 4.024±0.01
ENST00000480196 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000159055 ENST00000290130 1.991±0.00 3.413±0.00 0.184±0.00 0.816±0.21 1.328±0.90 1.350±0.57 0.484±0.40 1.112±0.77 0.750±0.12 0.296±0.13 0.094±0.07 7.680±4.54 4.155±0.95 10.885±0.56
ENST00000486363 N/A N/A 0.283±0.00 N/A 2.314±0.00 2.843±0.00 N/A 1.207±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000227256 ENST00000453549 0.034±0.00 0.084±0.00 0.089±0.00 0.176±0.00 0.115±0.10 0.451±0.00 N/A 0.033±0.00 0.160±0.00 0.125±0.00 N/A 0.108±0.00 N/A 0.274±0.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022978 ENSMUST00000099554 3.452±0.77 2.760±1.08 5.267±1.66 7.010±5.30 3.277±1.60 5.870±1.43 0.934±0.28 2.075±0.29 12.179±12.40 4.135±0.68 0.594±0.24 9.204±4.07 12.786±9.93 7.675±3.70
ENSMUST00000129171 0.380±0.03 0.212±0.08 0.648±0.37 0.625±0.42 0.296±0.12 0.506±0.09 0.159±0.03 N/A 1.571±0.93 0.464±0.10 0.081±0.03 0.756±0.30 0.340±0.04 0.676±0.04
ENSMUST00000147546 N/A N/A N/A 1.291±0.00 1.737±0.40 2.185±0.62 1.000±0.39 0.801±0.00 0.735±0.23 N/A 0.402±0.04 4.798±2.04 10.118±4.86 N/A
ENSMUSG00000039956 ENSMUST00000038197 227.692±97.17 373.049±14.29 5.131±1.77 0.056±0.01 165.257±20.57 1.267±0.49 13.008±4.52 13.013±3.06 51.858±24.30 9.669±2.03 0.696±0.37 65.933±13.42 2.939±0.94 3.941±1.86
ENSMUST00000125429 N/A N/A N/A N/A 18.218±0.00 0.168±0.02 N/A N/A N/A N/A N/A N/A 0.534±0.00 N/A
ENSMUST00000133973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.167±0.00 N/A N/A N/A
ENSMUST00000138984 N/A N/A N/A 0.040±0.03 N/A 0.576±0.06 N/A N/A N/A N/A N/A 18.282±0.40 N/A N/A
ENSMUSG00000097757 ENSMUST00000181232 0.491±0.25 0.167±0.08 0.211±0.00 0.147±0.05 0.293±0.12 0.072±0.03 0.048±0.00 0.218±0.04 0.164±0.10 0.098±0.05 0.061±0.03 0.279±0.12 0.365±0.12 1.786±0.71

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