C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MIS18 kinetochore protein homolog A (S. pombe)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099554 Mis18a-001 ENSMUSG00000022978 10090 - 16:90719312-90727404 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099554
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099554 3.452±0.77 2.760±1.08 5.267±1.66 7.010±5.30 3.277±1.60 5.870±1.43 0.934±0.28 2.075±0.29 12.179±12.40 4.135±0.68 0.594±0.24 9.204±4.07 12.786±9.93 7.675±3.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001F2 CIL_0001F2_0002 CGP 16:90386397-90727404
CIL_0001I6 CIL_0001I6_0002 CGP 16:90719312-90749785

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000775 IDA chromosome, centromeric region
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007059 IMP chromosome segregation
GO:0007067 IEA mitotic nuclear division
GO:0034080 IMP CENP-A containing nucleosome assembly
GO:0044030 IMP regulation of DNA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290130 MIS18A-001 protein_coding Homo_sapiens 0 424

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