C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: keratin 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023039 Krt7 10090 + 15:101411043-101430313 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000068904 Krt7-001 101412402-101430313 protein_coding
  ENSMUST00000131069 Krt7-002 101412449-101427789 retained_intron
  ENSMUST00000141190 Krt7-004 101411043-101411983 processed_transcript
  ENSMUST00000147662 Krt7-003 101411103-101419507 protein_coding
  ENSMUST00000153021 Krt7-005 101411052-101412395 processed_transcript
  ENSMUST00000183401 Krt7-006 101411052-101427611 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068904ENSMUST00000131069ENSMUST00000141190ENSMUST00000147662
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068904 4.492±3.16 0.241±0.11 N/A 0.066±0.03 20.703±10.31 38.398±1.63 0.329±0.15 10.990±3.94 0.205±0.13 23.593±11.71 0.019±0.01 15.375±9.75 29.575±11.89 0.121±0.07
ENSMUST00000131069 3.979±3.28 0.277±0.05 46.191±5.54 0.291±0.10 7.924±1.85 9.188±1.30 0.657±0.31 10.258±2.77 0.384±0.27 20.219±4.01 0.031±0.02 4.788±1.43 76.038±32.80 0.133±0.09
ENSMUST00000141190 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 N/A N/A N/A
ENSMUST00000147662 N/A N/A N/A 0.869±0.00 N/A N/A N/A N/A 1.144±0.28 N/A N/A 19.893±5.38 239.603±150.50 1.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0002 CGP 15:101349571-101430313
CIL_00033Q CIL_00033Q_000Q CGP 15:101411043-101438804

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0045095 IEA keratin filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017624 krt4 keratin 4 protein_coding Danio_rerio
ENSDARG00000043242 si:dkey-222f2.1 si:dkey-222f2.1 protein_coding Danio_rerio
ENSDARG00000058358 krt8 keratin 8 protein_coding Danio_rerio
ENSDARG00000058371 krt5 keratin 5 protein_coding Danio_rerio
ENSDARG00000058462 zgc:158846 zgc:158846 protein_coding Danio_rerio
ENSG00000135480 KRT7 keratin 7 protein_coding Homo_sapiens

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