C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000068904 Krt7-001 ENSMUSG00000023039 10090 + 15:101412402-101430313 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000068904
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000068904 4.492±3.16 0.241±0.11 0.066±0.03 20.703±10.31 38.398±1.63 0.329±0.15 10.990±3.94 0.205±0.13 23.593±11.71 0.019±0.01 15.375±9.75 29.575±11.89 0.121±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0002 CGP 15:101349571-101430313
CIL_00033Q CIL_00033Q_000Q CGP 15:101411043-101438804

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0045095 IEA keratin filament
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000065351 krt4-201 protein_coding Danio_rerio 0 324
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 0 324
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 582
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 0 518
ENST00000252250 KRT6C-001 protein_coding Homo_sapiens 0 523
ENST00000252252 KRT6B-001 protein_coding Homo_sapiens 0 521
ENST00000257860 PRPH-001 protein_coding Homo_sapiens 3e-28 132
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 0 516
ENST00000293745 KRT72-201 protein_coding Homo_sapiens 0 372
ENST00000305620 KRT74-001 protein_coding Homo_sapiens 0 294
ENST00000305748 KRT73-001 protein_coding Homo_sapiens 0 375
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 555
ENST00000331817 KRT7-001 protein_coding Homo_sapiens 0 1343
ENST00000354310 KRT72-002 protein_coding Homo_sapiens 9e-31 139
ENST00000396270 KRT8P39-001 processed_pseudogene Homo_sapiens 0 283
ENST00000399259 KRT8P6-001 processed_pseudogene Homo_sapiens 2e-16 92
ENST00000406052 KRT8P43-001 processed_pseudogene Homo_sapiens 0 263
ENST00000414254 KRT8P14-001 processed_pseudogene Homo_sapiens 0 274
ENST00000414328 KRT8P45-001 processed_pseudogene Homo_sapiens 0 381
ENST00000417996 KRT3-001 protein_coding Homo_sapiens 0 353
ENST00000425226 KRT8P15-001 processed_pseudogene Homo_sapiens 0 392
ENST00000434750 KRT8P8-001 processed_pseudogene Homo_sapiens 0 344
ENST00000438938 KRT8P51-001 processed_pseudogene Homo_sapiens 7e-34 147
ENST00000451609 KRT8P37-001 processed_pseudogene Homo_sapiens 0 348
ENST00000453110 KRT8P17-001 processed_pseudogene Homo_sapiens 0 364
ENST00000483942 KRT8P35-001 processed_pseudogene Homo_sapiens 0 324
ENST00000504812 KRT8P31-001 processed_pseudogene Homo_sapiens 0 368
ENST00000508125 KRT8P33-001 processed_pseudogene Homo_sapiens 0 435
ENST00000512863 KRT8P32-001 processed_pseudogene Homo_sapiens 0 375
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 0 326
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 0 479
ENST00000530631 PRPH-003 retained_intron Homo_sapiens 7e-29 132
ENST00000532332 PRPH-004 protein_coding Homo_sapiens 7e-29 132
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 0 396
ENST00000533985 KRT8P41-001 processed_pseudogene Homo_sapiens 0 285
ENST00000537672 KRT72-001 protein_coding Homo_sapiens 0 372
ENST00000546384 KRT74-002 retained_intron Homo_sapiens 4e-34 148
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 0 387
ENST00000546826 KRT8-013 protein_coding Homo_sapiens 0 292
ENST00000546856 KRT7-006 processed_transcript Homo_sapiens 0 399
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 0 516
ENST00000546900 KRT8-017 protein_coding Homo_sapiens 4e-19 99
ENST00000546934 KRT73-002 retained_intron Homo_sapiens 6e-34 150
ENST00000547031 KRT8-020 retained_intron Homo_sapiens 0 396
ENST00000547176 KRT8-019 nonsense_mediated_decay Homo_sapiens 3e-22 108
ENST00000547413 KRT8-016 protein_coding Homo_sapiens 3e-37 159
ENST00000548088 KRT7-003 retained_intron Homo_sapiens 0 287
ENST00000548657 KRT7-011 processed_transcript Homo_sapiens 0 252
ENST00000548998 KRT8-014 protein_coding Homo_sapiens 0 219
ENST00000549127 KRT7-018 processed_transcript Homo_sapiens 0 233
ENST00000549176 KRT8-018 retained_intron Homo_sapiens 0 298
ENST00000549343 KRT74-003 protein_coding Homo_sapiens 2e-33 148
ENST00000549420 KRT5-005 protein_coding Homo_sapiens 0 224
ENST00000549600 KRT6A-004 retained_intron Homo_sapiens 0 206
ENST00000549754 KRT6A-003 retained_intron Homo_sapiens 0 270
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 2.00386e-43 180
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 0 387
ENST00000550829 KRT72-003 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000551275 KRT5-004 protein_coding Homo_sapiens 0.0000000000006 79
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 0 516
ENST00000552322 KRT7-008 processed_transcript Homo_sapiens 0 305
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 0 516
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 571
ENST00000552855 KRT73-003 protein_coding Homo_sapiens 0 226
ENST00000558927 KRT8P9-001 processed_pseudogene Homo_sapiens 0 324
ENST00000560090 KRT8P23-001 processed_pseudogene Homo_sapiens 0 385
ENST00000560290 KRT8P24-001 processed_pseudogene Homo_sapiens 0 300
ENST00000562317 KRT8P22-001 processed_pseudogene Homo_sapiens 0 281
ENST00000577607 KRT8P34-001 processed_pseudogene Homo_sapiens 0.000000002 68
ENST00000592443 KRT8P5-001 processed_pseudogene Homo_sapiens 0 292
ENST00000604166 KRT8P49-001 processed_pseudogene Homo_sapiens 0 340
ENST00000604727 KRT8P47-001 processed_pseudogene Homo_sapiens 0 327

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