C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000147662 Krt7-003 ENSMUSG00000023039 10090 + 15:101411103-101419507 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverOvaryPlacentaTestisENSMUST00000147662
Transcript ID Brain Liver Ovary Placenta Testis
ENSMUST00000147662 0.869±0.00 1.144±0.28 19.893±5.38 239.603±150.50 1.050±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0002 CGP 15:101349571-101430313
CIL_00033Q CIL_00033Q_000Q CGP 15:101411043-101438804

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000065351 krt4-201 protein_coding Danio_rerio 9.99995e-41 171
ENSDART00000012644 krt4-001 protein_coding Danio_rerio 9.99995e-41 171
ENST00000252242 KRT5-001 protein_coding Homo_sapiens 0 243
ENST00000252245 KRT75-001 protein_coding Homo_sapiens 0 207
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 3e-40 171
ENST00000331817 KRT7-001 protein_coding Homo_sapiens 0 518
ENST00000396270 KRT8P39-001 processed_pseudogene Homo_sapiens 9e-30 135
ENST00000399259 KRT8P6-001 processed_pseudogene Homo_sapiens 2e-16 92
ENST00000425226 KRT8P15-001 processed_pseudogene Homo_sapiens 7e-31 139
ENST00000434750 KRT8P8-001 processed_pseudogene Homo_sapiens 4e-23 113
ENST00000438938 KRT8P51-001 processed_pseudogene Homo_sapiens 7e-34 147
ENST00000483942 KRT8P35-001 processed_pseudogene Homo_sapiens 4e-23 113
ENST00000508125 KRT8P33-001 processed_pseudogene Homo_sapiens 1e-37 161
ENST00000512863 KRT8P32-001 processed_pseudogene Homo_sapiens 2e-32 145
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 8e-35 152
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 5e-37 159
ENST00000533003 KRT8P7-001 processed_pseudogene Homo_sapiens 5e-32 143
ENST00000533985 KRT8P41-001 processed_pseudogene Homo_sapiens 1e-33 148
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 1e-35 156
ENST00000546826 KRT8-013 protein_coding Homo_sapiens 2e-40 171
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 3e-40 171
ENST00000546900 KRT8-017 protein_coding Homo_sapiens 4e-19 99
ENST00000547413 KRT8-016 protein_coding Homo_sapiens 3e-36 156
ENST00000548998 KRT8-014 protein_coding Homo_sapiens 2e-40 171
ENST00000549176 KRT8-018 retained_intron Homo_sapiens 5e-20 102
ENST00000549420 KRT5-005 protein_coding Homo_sapiens 0 219
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 1e-35 156
ENST00000551275 KRT5-004 protein_coding Homo_sapiens 0.00000000003 73
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 3e-40 171
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 4.00001e-40 171
ENST00000552629 KRT5-002 retained_intron Homo_sapiens 0 243
ENST00000558927 KRT8P9-001 processed_pseudogene Homo_sapiens 4e-33 147
ENST00000560090 KRT8P23-001 processed_pseudogene Homo_sapiens 6e-31 139
ENST00000560290 KRT8P24-001 processed_pseudogene Homo_sapiens 1e-23 115
ENST00000577607 KRT8P34-001 processed_pseudogene Homo_sapiens 0.000000002 68
ENST00000592443 KRT8P5-001 processed_pseudogene Homo_sapiens 3e-30 137

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