C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023088 Abcc1 10090 + 16:14361558-14475737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000100167 Abcc1-001 14361560-14475737 protein_coding
  ENSMUST00000130671 Abcc1-010 14361558-14473902 nonsense_mediated_decay
  ENSMUST00000133454 Abcc1-003 14361558-14473902 nonsense_mediated_decay
  ENSMUST00000134776 Abcc1-011 14361581-14405061 protein_coding
  ENSMUST00000134960 Abcc1-006 14461008-14468236 retained_intron
  ENSMUST00000144074 Abcc1-009 14393953-14394327 processed_transcript
  ENSMUST00000144676 Abcc1-007 14365762-14391443 protein_coding
  ENSMUST00000146032 Abcc1-005 14461013-14474042 retained_intron
  ENSMUST00000147759 Abcc1-004 14361558-14473902 nonsense_mediated_decay
  ENSMUST00000154748 Abcc1-008 14361576-14396405 protein_coding
  ENSMUST00000156089 Abcc1-002 14402360-14420743 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100167ENSMUST00000130671ENSMUST00000133454ENSMUST00000134776ENSMUST00000146032ENSMUST00000147759ENSMUST00000154748
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100167 5.102±1.23 4.248±0.70 3.754±1.19 1.771±0.90 11.240±2.00 7.059±2.81 1.272±0.35 2.956±2.28 1.375±0.68 6.743±1.75 1.861±0.84 10.190±3.54 3.628±3.47 2.269±1.30
ENSMUST00000130671 N/A 1.444±0.00 N/A N/A 4.299±0.35 N/A N/A 1.045±0.00 0.208±0.00 N/A N/A 2.628±0.26 N/A 0.856±0.00
ENSMUST00000133454 N/A N/A N/A N/A 9.945±0.00 N/A N/A N/A 0.090±0.03 N/A N/A 1.369±0.00 2.752±0.16 N/A
ENSMUST00000134776 N/A 12.228±0.74 N/A N/A N/A N/A 12.827±0.44 10.548±2.47 0.759±0.00 N/A N/A N/A N/A N/A
ENSMUST00000146032 N/A 4.713±0.00 N/A 1.927±0.00 N/A N/A N/A N/A N/A N/A N/A 3.856±0.00 4.152±1.35 1.874±0.00
ENSMUST00000147759 N/A N/A N/A 1.653±0.00 N/A N/A N/A N/A N/A N/A N/A 2.443±0.00 N/A 0.798±0.00
ENSMUST00000154748 N/A 14.554±0.00 N/A N/A N/A 22.608±0.00 N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MS CIL_0006MS_0002 CGP 16:14299244-14475737

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059874 ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein_coding Danio_rerio
ENSG00000103222 ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 protein_coding Homo_sapiens

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