C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family C (CFTR/MRP), member 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100167 Abcc1-001 ENSMUSG00000023088 10090 + 16:14361560-14475737 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100167
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100167 5.102±1.23 4.248±0.70 3.754±1.19 1.771±0.90 11.240±2.00 7.059±2.81 1.272±0.35 2.956±2.28 1.375±0.68 6.743±1.75 1.861±0.84 10.190±3.54 3.628±3.47 2.269±1.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006MS CIL_0006MS_0002 CGP 16:14299244-14475737

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005886 IEA plasma membrane
GO:0005887 IDA integral component of plasma membrane
GO:0006200 IEA ATP catabolic process
GO:0016020 IEA membrane
GO:0042626 IEA ATPase activity, coupled to transmembrane movement of substances
GO:0055085 IEA transmembrane transport
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399408 ABCC1-201 protein_coding Homo_sapiens 0 2503
ENST00000399410 ABCC1-001 protein_coding Homo_sapiens 0 4340
ENST00000572053 ABCC1-005 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000572882 ABCC1-007 protein_coding Homo_sapiens 0 2121
ENST00000574224 ABCC1-002 retained_intron Homo_sapiens 0 1206
ENST00000574761 ABCC1-006 retained_intron Homo_sapiens 0 688
ENST00000575422 ABCC1-003 retained_intron Homo_sapiens 0 894
ENST00000621144 ABCC1-202 protein_coding Homo_sapiens 0 4346
ENST00000621659 ABCC1-203 protein_coding Homo_sapiens 0 1893
ENST00000622828 ABCC1-204 protein_coding Homo_sapiens 0 2503

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