C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: poly (ADP-ribose) polymerase family, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023249 Parp3 10090 - 9:106470322-106476949 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000067218 Parp3-001 106470322-106476949 protein_coding
  ENSMUST00000112479 Parp3-002 106470989-106476669 protein_coding
  ENSMUST00000123555 Parp3-004 106470627-106476376 protein_coding
  ENSMUST00000125850 Parp3-003 106474659-106476395 protein_coding
  ENSMUST00000139362 Parp3-008 106470995-106472018 retained_intron
  ENSMUST00000140029 Parp3-006 106474629-106476596 retained_intron
  ENSMUST00000145396 Parp3-005 106470989-106476169 retained_intron
  ENSMUST00000156426 Parp3-007 106474422-106476104 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000067218ENSMUST00000112479ENSMUST00000123555ENSMUST00000139362ENSMUST00000145396
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000067218 3.738±0.00 N/A 6.371±1.28 N/A 5.853±1.17 N/A 2.851±0.19 2.237±0.63 1.615±0.06 3.591±0.27 5.715±1.10 2.780±0.00 1.494±0.09 1.271±0.14
ENSMUST00000112479 19.635±9.74 8.322±1.30 N/A 2.439±0.00 9.601±2.17 5.664±1.06 2.822±0.00 3.501±0.83 2.813±0.87 6.342±0.00 7.243±0.75 8.561±2.61 N/A N/A
ENSMUST00000123555 9.500±4.02 N/A 9.292±2.17 1.502±0.00 4.489±0.35 5.670±0.00 4.600±0.50 2.780±0.40 2.319±0.70 7.335±1.49 17.958±3.00 5.729±0.00 1.577±0.38 N/A
ENSMUST00000139362 N/A 17.678±2.47 N/A N/A 32.391±4.85 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145396 16.996±5.61 10.214±1.79 7.962±0.00 N/A 16.820±2.48 8.245±1.45 5.029±0.77 3.210±0.86 2.863±0.58 10.152±0.80 N/A 7.748±1.17 N/A 1.032±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000723 IEA telomere maintenance
GO:0003950 IEA NAD+ ADP-ribosyltransferase activity
GO:0006302 IGI double-strand break repair
GO:0006471 IEA protein ADP-ribosylation
GO:0035861 IDA site of double-strand break
GO:0051106 IEA positive regulation of DNA ligation
GO:0060236 IEA regulation of mitotic spindle organization
GO:1990166 IEA protein localization to site of double-strand break

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003961 parp3 poly (ADP-ribose) polymerase family, member 3 protein_coding Danio_rerio
ENSG00000041880 PARP3 poly (ADP-ribose) polymerase family, member 3 protein_coding Homo_sapiens

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