C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly (ADP-ribose) polymerase family, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112479 Parp3-002 ENSMUSG00000023249 10090 - 9:106470989-106476669 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000112479
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000112479 19.635±9.74 8.322±1.30 2.439±0.00 9.601±2.17 5.664±1.06 2.822±0.00 3.501±0.83 2.813±0.87 6.342±0.00 7.243±0.75 8.561±2.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NT CIL_0008NT_0002 VISTA 9:106082995-106685663
CIL_00087C CIL_00087C_0002 VISTA 9:106116951-106718793

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003950 IEA NAD+ ADP-ribosyltransferase activity
GO:0006302 IGI double-strand break repair
GO:0006471 IEA protein ADP-ribosylation
GO:0035861 IDA site of double-strand break

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000398755 PARP3-001 protein_coding Homo_sapiens 0 1299
ENST00000417220 PARP3-002 protein_coding Homo_sapiens 0 1299
ENST00000431474 PARP3-201 protein_coding Homo_sapiens 0 1304
ENST00000471971 PARP3-003 nonsense_mediated_decay Homo_sapiens 0 1304
ENST00000475782 PARP3-006 retained_intron Homo_sapiens 0 547
ENST00000486510 PARP3-008 processed_transcript Homo_sapiens 0 292
ENST00000498510 PARP3-005 protein_coding Homo_sapiens 0 728

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