C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclin D-type binding-protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023572 Ccndbp1 10090 + 2:121008403-121016904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060455 Ccndbp1-001 121008403-121016904 protein_coding
  ENSMUST00000099488 Ccndbp1-003 121008432-121015120 protein_coding
  ENSMUST00000099489 Ccndbp1-002 121008448-121016904 protein_coding
  ENSMUST00000129717 Ccndbp1-007 121012491-121012960 processed_transcript
  ENSMUST00000135036 Ccndbp1-006 121011055-121011756 retained_intron
  ENSMUST00000140468 Ccndbp1-005 121008467-121012948 processed_transcript
  ENSMUST00000151532 Ccndbp1-004 121008704-121010577 retained_intron
  ENSMUST00000171260 Ccndbp1-201 121008472-121016513 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060455ENSMUST00000099488ENSMUST00000099489ENSMUST00000129717ENSMUST00000140468ENSMUST00000171260
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060455 10.034±2.05 6.776±1.70 27.746±3.87 16.826±6.27 11.726±5.02 7.303±1.96 14.271±1.67 20.289±2.13 17.974±13.09 12.535±1.43 9.477±0.76 6.396±7.39 9.797±3.52 5.672±0.83
ENSMUST00000099488 N/A 4.244±1.61 N/A 4.177±0.00 N/A 2.558±0.44 N/A N/A 1.812±0.28 N/A 1.554±0.00 3.269±1.80 3.061±1.15 N/A
ENSMUST00000099489 2.985±0.91 2.301±0.41 N/A N/A 3.924±0.74 2.643±0.53 N/A N/A 2.261±2.02 4.149±0.42 N/A 3.117±1.29 1.841±0.34 1.205±0.08
ENSMUST00000129717 N/A N/A N/A 37.813±0.00 N/A N/A N/A N/A N/A N/A N/A 33.864±0.00 N/A N/A
ENSMUST00000140468 N/A 5.378±0.00 N/A 26.093±0.00 N/A N/A N/A N/A N/A N/A N/A 6.427±7.37 11.455±5.87 11.065±0.00
ENSMUST00000171260 2.838±0.05 3.870±0.00 N/A 10.050±0.00 2.451±0.00 3.115±1.41 N/A N/A 1.517±0.00 2.535±0.00 N/A 2.124±0.63 3.619±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0002 CGP 2:120977017-121016904

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISO nucleus
GO:0005737 IEA cytoplasm
GO:0007049 IEA cell cycle
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039328 CCNDBP1 cyclin D-type binding-protein 1 protein_coding Danio_rerio
ENSG00000166946 CCNDBP1 cyclin D-type binding-protein 1 protein_coding Homo_sapiens

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