C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin D-type binding-protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000060455 Ccndbp1-001 ENSMUSG00000023572 10090 + 2:121008403-121016904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060455
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060455 10.034±2.05 6.776±1.70 27.746±3.87 16.826±6.27 11.726±5.02 7.303±1.96 14.271±1.67 20.289±2.13 17.974±13.09 12.535±1.43 9.477±0.76 6.396±7.39 9.797±3.52 5.672±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YC CIL_0005YC_0002 CGP 2:120977017-121016904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 ISO nucleus
GO:0005737 IEA cytoplasm
GO:0007049 IEA cell cycle
GO:0051726 IEA regulation of cell cycle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300213 CCNDBP1-001 protein_coding Homo_sapiens 0 1038
ENST00000444658 CCNDBP1-017 retained_intron Homo_sapiens 0 867
ENST00000562553 CCNDBP1-014 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000563065 CCNDBP1-003 nonsense_mediated_decay Homo_sapiens 0 830
ENST00000564630 CCNDBP1-005 retained_intron Homo_sapiens 0 706
ENST00000565296 CCNDBP1-010 nonsense_mediated_decay Homo_sapiens 0 878
ENST00000566515 CCNDBP1-009 nonsense_mediated_decay Homo_sapiens 0 878
ENST00000566882 CCNDBP1-007 retained_intron Homo_sapiens 0 619
ENST00000567434 CCNDBP1-013 nonsense_mediated_decay Homo_sapiens 0 462
ENST00000567690 CCNDBP1-015 retained_intron Homo_sapiens 0 579
ENST00000568507 CCNDBP1-006 nonsense_mediated_decay Homo_sapiens 0 688
ENST00000568936 CCNDBP1-008 retained_intron Homo_sapiens 0 525
ENST00000569745 CCNDBP1-002 nonsense_mediated_decay Homo_sapiens 0 832

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