C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PHD finger protein 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000023883 Phf10 10090 - 17:14945009-14961273 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000024657 Phf10-001 14945009-14961273 protein_coding
  ENSMUST00000167805 Phf10-003 14955711-14959527 retained_intron
  ENSMUST00000168938 Phf10-002 14947738-14961273 nonsense_mediated_decay
  ENSMUST00000171526 Phf10-005 14945014-14946828 retained_intron
  ENSMUST00000172054 Phf10-004 14946566-14952706 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024657ENSMUST00000168938ENSMUST00000171526ENSMUST00000172054
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024657 10.760±3.48 N/A 28.399±9.90 29.796±13.30 7.345±1.18 13.165±2.29 5.427±0.72 10.037±1.14 38.504±42.10 9.344±1.93 9.188±1.98 12.818±5.01 18.352±3.60 50.120±19.71
ENSMUST00000168938 2.427±0.00 6.860±0.00 9.565±2.22 15.258±5.08 N/A 4.527±0.00 4.683±0.00 2.748±0.28 9.389±5.20 3.660±0.00 5.185±1.43 8.899±3.11 3.404±0.82 1.308±0.00
ENSMUST00000171526 N/A N/A N/A N/A 15.256±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 33.710±0.00
ENSMUST00000172054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 48.360±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0002 CGP 17:14829331-14959570
CIL_0004W9 CIL_0004W9_0002 CGP 17:14943184-14961273
CIL_0004WA CIL_0004WA_0002 CGP 17:14945009-15041537

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070084 phf10 PHD finger protein 10 protein_coding Danio_rerio
ENSG00000130024 PHF10 PHD finger protein 10 protein_coding Homo_sapiens

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