C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PHD finger protein 10
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000130024 PHF10 9606 - 6:169703905-169725566 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000339209 PHF10-001 169703905-169724055 protein_coding
  ENST00000366780 PHF10-002 169703905-169723931 protein_coding
  ENST00000464779 PHF10-004 169717742-169719298 processed_transcript
  ENST00000480008 PHF10-003 169707028-169724005 retained_intron
  ENST00000612128 PHF10-201 169707028-169724005 protein_coding
  ENST00000621772 PHF10-202 169703908-169725566 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000339209ENST00000366780ENST00000480008ENST00000612128
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000339209 6.769±0.00 5.600±0.00 N/A 8.240±0.00 11.591±0.00 N/A 7.917±0.00 N/A 13.415±0.00 N/A 8.503±0.07 5.018±1.69 8.475±0.00
ENST00000366780 6.212±0.00 N/A N/A N/A 1.894±0.00 N/A 2.080±0.00 3.571±1.40 N/A 5.513±0.00 9.411±1.77 4.077±1.10 5.190±0.00
ENST00000480008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.954±0.00 N/A N/A
ENST00000612128 6.594±0.00 N/A 6.978±3.03 4.350±1.82 5.547±2.63 6.978±3.36 3.612±1.75 1.852±0.23 5.576±1.78 5.615±3.08 9.713±3.29 2.272±0.38 8.707±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0001 CGP 6:169457212-169704856
CIL_0004W9 CIL_0004W9_0001 CGP 6:169702190-169725566
CIL_0004WA CIL_0004WA_0001 CGP 6:169703905-169751559

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IEA nervous system development
GO:0008270 IEA zinc ion binding
GO:0071564 ISS npBAF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070084 phf10 PHD finger protein 10 protein_coding Danio_rerio
ENSMUSG00000023883 Phf10 PHD finger protein 10 protein_coding Mus_musculus

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