C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024657 Phf10-001 ENSMUSG00000023883 10090 - 17:14945009-14961273 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024657
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024657 10.760±3.48 28.399±9.90 29.796±13.30 7.345±1.18 13.165±2.29 5.427±0.72 10.037±1.14 38.504±42.10 9.344±1.93 9.188±1.98 12.818±5.01 18.352±3.60 50.120±19.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0002 CGP 17:14829331-14959570
CIL_0004W9 CIL_0004W9_0002 CGP 17:14943184-14961273
CIL_0004WA CIL_0004WA_0002 CGP 17:14945009-15041537

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000332290 C6orf120-001 protein_coding Homo_sapiens 1e-36 159
ENST00000339209 PHF10-001 protein_coding Homo_sapiens 0 2156
ENST00000366780 PHF10-002 protein_coding Homo_sapiens 0 2049
ENST00000434827 CTA-246H3.11-001 processed_pseudogene Homo_sapiens 0 793
ENST00000452540 RP13-228J13.8-001 processed_pseudogene Homo_sapiens 0 1122
ENST00000464779 PHF10-004 processed_transcript Homo_sapiens 0 289
ENST00000480008 PHF10-003 retained_intron Homo_sapiens 0 970
ENST00000612128 PHF10-201 protein_coding Homo_sapiens 0 1504
ENST00000621772 PHF10-202 protein_coding Homo_sapiens 0 1978

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