C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PHD finger protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000168938 Phf10-002 ENSMUSG00000023883 10090 - 17:14947738-14961273 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000168938
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000168938 2.427±0.00 6.860±0.00 9.565±2.22 15.258±5.08 4.527±0.00 4.683±0.00 2.748±0.28 9.389±5.20 3.660±0.00 5.185±1.43 8.899±3.11 3.404±0.82 1.308±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004W2 CIL_0004W2_0002 CGP 17:14829331-14959570
CIL_0004W9 CIL_0004W9_0002 CGP 17:14943184-14961273
CIL_0004WA CIL_0004WA_0002 CGP 17:14945009-15041537

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000121598 phf10-001 protein_coding Danio_rerio 9e-24 117
ENST00000339209 PHF10-001 protein_coding Homo_sapiens 0 977
ENST00000366780 PHF10-002 protein_coding Homo_sapiens 0 870
ENST00000434827 CTA-246H3.11-001 processed_pseudogene Homo_sapiens 0 496
ENST00000464779 PHF10-004 processed_transcript Homo_sapiens 0 289
ENST00000480008 PHF10-003 retained_intron Homo_sapiens 0 1482
ENST00000612128 PHF10-201 protein_coding Homo_sapiens 0 970
ENST00000621772 PHF10-202 protein_coding Homo_sapiens 0 800

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