C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein L-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024095 Hnrnpll 10090 - 17:80029487-80062334 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000061331 Hnrnpll-201 80029487-80062334 protein_coding
  ENSMUST00000183516 Hnrnpll-006 80030341-80035556 retained_intron
  ENSMUST00000184297 Hnrnpll-005 80029837-80062227 nonsense_mediated_decay
  ENSMUST00000184578 Hnrnpll-004 80037149-80062194 retained_intron
  ENSMUST00000184635 Hnrnpll-001 80029487-80062227 protein_coding
  ENSMUST00000184726 Hnrnpll-002 80051235-80062268 retained_intron
  ENSMUST00000184889 Hnrnpll-003 80045049-80062135 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000061331ENSMUST00000184297ENSMUST00000184578ENSMUST00000184635ENSMUST00000184889
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000061331 N/A N/A N/A N/A N/A 2.026±0.00 N/A 1.076±0.00 N/A N/A N/A N/A N/A 8.421±0.00
ENSMUST00000184297 4.780±1.01 7.395±5.53 8.177±1.14 9.144±5.68 4.386±1.35 7.677±3.18 2.026±0.53 3.539±1.64 4.306±2.62 6.833±2.56 2.288±0.51 10.049±7.65 8.470±2.31 13.677±6.45
ENSMUST00000184578 2.355±0.53 2.560±0.13 N/A N/A 1.922±0.29 N/A N/A N/A 1.263±0.33 N/A N/A 3.555±0.11 N/A N/A
ENSMUST00000184635 6.718±1.65 N/A 10.681±0.41 17.781±9.73 2.587±0.80 4.232±1.92 3.428±0.51 5.610±0.54 9.554±6.23 8.819±1.29 3.683±0.39 6.554±1.84 9.581±5.07 9.937±4.45
ENSMUST00000184889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.206±0.00 0.384±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002IR CIL_0002IR_0002 CGP 17:79848392-80062334
CIL_00009N CIL_00009N_0002 CGP 17:80029487-80185101

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 IEA RNA binding
GO:0003729 ISS mRNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0016020 IEA membrane
GO:0030529 IEA ribonucleoprotein complex
GO:0033120 ISS positive regulation of RNA splicing
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000143889 HNRNPLL heterogeneous nuclear ribonucleoprotein L-like protein_coding Homo_sapiens

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