C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: multiple coagulation factor deficiency 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000024963 Mcfd2-001 ENSMUSG00000024150 10090 - 17:87254658-87265935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000024963
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000024963 33.084±5.28 66.836±5.38 36.816±3.41 13.286±1.63 26.885±6.67 37.996±3.50 15.936±4.47 42.009±7.26 61.769±27.19 31.625±7.14 10.987±2.64 48.094±14.10 37.763±24.26 9.472±2.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0002 VISTA 17:87075116-87678515
CIL_0006KK CIL_0006KK_0002 CGP 17:87107679-87265935
CIL_0003T5 CIL_0003T5_0003 CGP 17:87254658-87381769

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005576 ISA extracellular region
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0015031 IEA protein transport
GO:0016192 IEA vesicle-mediated transport
GO:0019752 ISA carboxylic acid metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000319466 MCFD2-001 protein_coding Homo_sapiens 0 422
ENST00000409105 MCFD2-002 protein_coding Homo_sapiens 0 422
ENST00000409147 MCFD2-010 protein_coding Homo_sapiens 0 298
ENST00000409207 MCFD2-003 protein_coding Homo_sapiens 0 422
ENST00000409218 MCFD2-005 protein_coding Homo_sapiens 0 387
ENST00000409800 MCFD2-008 protein_coding Homo_sapiens 0 331
ENST00000409913 MCFD2-009 protein_coding Homo_sapiens 0 333
ENST00000409973 MCFD2-004 protein_coding Homo_sapiens 0 422
ENST00000412438 MCFD2-006 protein_coding Homo_sapiens 0 379
ENST00000434262 MCFD2-011 protein_coding Homo_sapiens 0 252
ENST00000444761 MCFD2-201 protein_coding Homo_sapiens 0 331
ENST00000477791 MCFD2-014 retained_intron Homo_sapiens 0 278
ENST00000479225 MCFD2-012 retained_intron Homo_sapiens 0 278

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