C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mindbomb homolog 1 (Drosophila)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024294 Mib1 10090 + 18:10725548-10818704 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000052838 Mib1-001 10725548-10818578 protein_coding
  ENSMUST00000124288 Mib1-004 10760809-10818704 protein_coding
  ENSMUST00000131073 Mib1-003 10725744-10755699 retained_intron
  ENSMUST00000150000 Mib1-002 10798365-10817628 protein_coding
  ENSMUST00000165555 Mib1-201 10725655-10812174 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052838ENSMUST00000124288ENSMUST00000131073ENSMUST00000150000ENSMUST00000165555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052838 10.648±3.58 7.839±2.55 2.361±0.68 9.431±1.47 7.248±0.80 7.331±1.21 3.570±0.11 8.380±0.76 5.196±2.19 11.871±0.36 2.480±1.78 15.031±3.84 4.486±1.26 3.209±0.99
ENSMUST00000124288 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.552±0.00
ENSMUST00000131073 N/A 7.099±3.55 N/A N/A N/A 4.576±0.91 N/A N/A N/A N/A N/A 5.599±0.00 N/A 8.681±1.19
ENSMUST00000150000 N/A N/A 6.657±0.43 3.563±0.00 N/A N/A N/A N/A 2.468±0.38 N/A 7.238±0.58 5.741±0.61 3.160±0.01 N/A
ENSMUST00000165555 N/A N/A N/A 15.952±0.00 N/A N/A N/A N/A N/A N/A N/A 14.727±0.00 5.118±2.04 21.642±9.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084R CIL_00084R_0002 VISTA 18:10435381-11036621
CIL_0005NX CIL_0005NX_0002 CGP 18:10644411-10818704
CIL_0005NR CIL_0005NR_0002 CGP 18:10725548-11085635

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0001701 IMP in utero embryonic development
GO:0001756 IMP somitogenesis
GO:0001841 IMP neural tube formation
GO:0001947 IMP heart looping
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005886 IEA plasma membrane
GO:0007219 IMP Notch signaling pathway
GO:0007507 IMP heart development
GO:0008270 IEA zinc ion binding
GO:0014069 IEA postsynaptic density
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IDA cytoplasmic vesicle
GO:0045665 IMP negative regulation of neuron differentiation
GO:0045807 IDA positive regulation of endocytosis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055581 MIB1 (1 of 2) mindbomb E3 ubiquitin protein ligase 1 protein_coding Danio_rerio
ENSG00000101752 MIB1 mindbomb E3 ubiquitin protein ligase 1 protein_coding Homo_sapiens

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