C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mindbomb homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000052838 Mib1-001 ENSMUSG00000024294 10090 + 18:10725548-10818578 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000052838
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000052838 10.648±3.58 7.839±2.55 2.361±0.68 9.431±1.47 7.248±0.80 7.331±1.21 3.570±0.11 8.380±0.76 5.196±2.19 11.871±0.36 2.480±1.78 15.031±3.84 4.486±1.26 3.209±0.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084R CIL_00084R_0002 VISTA 18:10435381-11036621
CIL_0005NX CIL_0005NX_0002 CGP 18:10644411-10818704
CIL_0005NR CIL_0005NR_0002 CGP 18:10725548-11085635

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001568 IMP blood vessel development
GO:0001701 IMP in utero embryonic development
GO:0001756 IMP somitogenesis
GO:0001841 IMP neural tube formation
GO:0001947 IMP heart looping
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005813 IEA centrosome
GO:0005886 IEA plasma membrane
GO:0007219 IMP Notch signaling pathway
GO:0007507 IMP heart development
GO:0008270 IEA zinc ion binding
GO:0014069 IEA postsynaptic density
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IDA cytoplasmic vesicle
GO:0045665 IMP negative regulation of neuron differentiation
GO:0045807 IDA positive regulation of endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000077966 MIB1 (1 of 2)-201 protein_coding Danio_rerio 0 614
ENST00000261537 MIB1-001 protein_coding Homo_sapiens 0 4205
ENST00000577749 MIB1-003 processed_transcript Homo_sapiens 0 560
ENST00000578260 MIB1-002 retained_intron Homo_sapiens 0 473
ENST00000578646 MIB1-004 processed_transcript Homo_sapiens 0 2837

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