C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mindbomb E3 ubiquitin protein ligase 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101752 MIB1 9606 + 18:21704957-21870957 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261537 MIB1-001 21741320-21870957 protein_coding
  ENST00000577749 MIB1-003 21798084-21819558 processed_transcript
  ENST00000578260 MIB1-002 21803733-21819558 retained_intron
  ENST00000578646 MIB1-004 21704957-21864974 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261537ENST00000578646
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261537 4.499±0.00 2.357±0.00 3.305±0.00 5.366±0.00 3.522±0.12 2.854±0.52 2.353±0.15 3.660±0.95 4.284±2.66 5.739±1.34 1.539±0.50 3.132±1.42 2.130±1.36 6.286±1.31
ENST00000578646 N/A N/A 2.775±0.00 4.582±0.00 5.420±0.00 5.451±0.00 2.265±0.00 N/A 6.648±0.00 N/A 0.486±0.00 7.754±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084R CIL_00084R_0001 VISTA 18:21458991-22061961
CIL_0005NX CIL_0005NX_0001 CGP 18:21650897-21870957
CIL_0005NR CIL_0005NR_0001 CGP 18:21704957-22202528

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001568 IEA blood vessel development
GO:0001701 IEA in utero embryonic development
GO:0001756 IEA somitogenesis
GO:0001841 IEA neural tube formation
GO:0001947 IEA heart looping
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005813 IDA centrosome
GO:0005829 TAS cytosol
GO:0005886 IEA plasma membrane
GO:0007219 TAS Notch signaling pathway
GO:0007507 IEA heart development
GO:0008270 IEA zinc ion binding
GO:0014069 IEA postsynaptic density
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0031410 IEA cytoplasmic vesicle
GO:0045665 IEA negative regulation of neuron differentiation
GO:0045807 IEA positive regulation of endocytosis
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055581 MIB1 (1 of 2) mindbomb E3 ubiquitin protein ligase 1 protein_coding Danio_rerio
ENSMUSG00000024294 Mib1 mindbomb homolog 1 (Drosophila) protein_coding Mus_musculus

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