C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CDC23 cell division cycle 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024370 Cdc23 10090 - 18:34630951-34651735 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025228 Cdc23-001 34630951-34651735 protein_coding
  ENSMUST00000133162 Cdc23-004 34636054-34651718 retained_intron
  ENSMUST00000133181 Cdc23-002 34631683-34651735 protein_coding
  ENSMUST00000135208 Cdc23-003 34647704-34651722 retained_intron
  ENSMUST00000136943 Cdc23-006 34641383-34645319 retained_intron
  ENSMUST00000136949 Cdc23-008 34636057-34637092 retained_intron
  ENSMUST00000138400 Cdc23-009 34633678-34634630 retained_intron
  ENSMUST00000151409 Cdc23-005 34646852-34651718 retained_intron
  ENSMUST00000155307 Cdc23-007 34637059-34637871 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025228ENSMUST00000133181ENSMUST00000138400
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025228 N/A N/A 4.014±0.00 3.645±0.00 N/A 1.866±0.00 N/A 2.559±0.46 0.859±0.14 3.257±0.00 1.691±0.12 4.867±2.23 6.061±0.00 N/A
ENSMUST00000133181 8.832±2.76 5.529±0.51 5.991±1.05 17.162±10.55 6.114±0.76 3.821±0.70 4.892±0.76 3.408±1.09 10.060±9.68 7.393±0.50 2.482±0.97 9.015±3.19 12.243±4.61 6.275±0.50
ENSMUST00000138400 19.868±2.13 13.059±1.74 N/A N/A 14.963±4.20 7.387±1.06 8.325±0.74 8.707±1.83 2.840±1.29 10.836±2.15 4.910±0.91 22.207±7.60 18.419±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P9 CIL_0005P9_0002 CGP 18:34598615-34633265
CIL_0005PA CIL_0005PA_0002 CGP 18:34624624-34651735
CIL_0005D9 CIL_0005D9_0002 CGP 18:34630951-34720387

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0005680 IEA anaphase-promoting complex
GO:0007067 IEA mitotic nuclear division
GO:0007080 IEA mitotic metaphase plate congression
GO:0030071 IEA regulation of mitotic metaphase/anaphase transition
GO:0051301 IEA cell division
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044484 cdc23 CDC23 (cell division cycle 23, yeast, homolog) protein_coding Danio_rerio
ENSG00000094880 CDC23 cell division cycle 23 protein_coding Homo_sapiens

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