C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC23 cell division cycle 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000133181 Cdc23-002 ENSMUSG00000024370 10090 - 18:34631683-34651735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000133181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000133181 8.832±2.76 5.529±0.51 5.991±1.05 17.162±10.55 6.114±0.76 3.821±0.70 4.892±0.76 3.408±1.09 10.060±9.68 7.393±0.50 2.482±0.97 9.015±3.19 12.243±4.61 6.275±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P9 CIL_0005P9_0002 CGP 18:34598615-34633265
CIL_0005PA CIL_0005PA_0002 CGP 18:34624624-34651735
CIL_0005D9 CIL_0005D9_0002 CGP 18:34630951-34720387

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005622 IEA intracellular
GO:0005680 ISS anaphase-promoting complex
GO:0007067 IEA mitotic nuclear division
GO:0007080 IEA mitotic metaphase plate congression
GO:0070979 ISS protein K11-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394886 CDC23-001 protein_coding Homo_sapiens 0 2257
ENST00000394894 KIF20A-001 protein_coding Homo_sapiens 0 383
ENST00000464806 CDC23-006 retained_intron Homo_sapiens 0 440
ENST00000471692 CDC23-003 retained_intron Homo_sapiens 0 641
ENST00000475021 CDC23-007 retained_intron Homo_sapiens 0 198
ENST00000502338 KIF20A-007 nonsense_mediated_decay Homo_sapiens 1e-39 167
ENST00000508792 KIF20A-002 protein_coding Homo_sapiens 0 383

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