C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005PA_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000112984-ENSG00000094880 | CGP | 9606 | 5:138178719-138213343  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000112983  (BRD8)bromodomain containing 8 |
ENST00000230901 (BRD8-002)
|
138156882-138178630 | protein_coding | |
|
ENST00000254900 (BRD8-001)
|
138139766-138178986 | protein_coding | ||
|
ENST00000402931 (BRD8-006)
|
138156882-138178633 | protein_coding | ||
|
ENST00000411594 (BRD8-201)
|
138156897-138178669 | protein_coding | ||
|
ENST00000418329 (BRD8-004)
|
138156882-138178599 | protein_coding | ||
|
ENST00000425764 (BRD8-012)
|
138169363-138178629 | processed_transcript | ||
|
ENST00000427976 (BRD8-019)
|
138140627-138152655 | protein_coding | ||
|
ENST00000428808 (BRD8-010)
|
138167987-138178629 | nonsense_mediated_decay | ||
|
ENST00000430331 (BRD8-007)
|
138171361-138178678 | protein_coding | ||
|
ENST00000432618 (BRD8-011)
|
138169263-138178953 | nonsense_mediated_decay | ||
|
ENST00000441656 (BRD8-005)
|
138156882-138177667 | protein_coding | ||
|
ENST00000450756 (BRD8-008)
|
138170381-138178628 | nonsense_mediated_decay | ||
|
ENST00000453824 (BRD8-013)
|
138165999-138171060 | protein_coding | ||
|
ENST00000454473 (BRD8-003)
|
138156882-138178599 | protein_coding | ||
|
ENST00000460746 (BRD8-016)
|
138159575-138161235 | retained_intron | ||
|
ENST00000463620 (BRD8-014)
|
138165112-138166945 | retained_intron | ||
|
ENST00000471437 (BRD8-009)
|
138177164-138178638 | retained_intron | ||
|
ENST00000471892 (BRD8-020)
|
138167643-138170880 | retained_intron | ||
|
ENST00000472478 (BRD8-018)
|
138156882-138160129 | nonsense_mediated_decay | ||
|
ENST00000483805 (BRD8-015)
|
138165022-138166225 | retained_intron | ||
|
ENST00000489351 (BRD8-017)
|
138160091-138162087 | retained_intron | ||
|
ENST00000506167 (BRD8-027)
|
138160968-138166061 | nonsense_mediated_decay | ||
|
ENST00000511898 (BRD8-026)
|
138162052-138165962 | protein_coding | ||
|
ENST00000512140 (BRD8-022)
|
138156915-138178630 | nonsense_mediated_decay | ||
|
ENST00000515014 (BRD8-028)
|
138160895-138164952 | processed_transcript | ||
|
ENST00000515254 (BRD8-025)
|
138170730-138178629 | retained_intron | ||
|
ENSG00000112984 (KIF20A) kinesin family member 20A |
ENST00000394894 (KIF20A-001)
|
138178998-138187715 | protein_coding | |
|
ENST00000502338 (KIF20A-007)
|
138184828-138187243 | nonsense_mediated_decay | ||
|
ENST00000503417 (KIF20A-006)
|
138179169-138181896 | retained_intron | ||
|
ENST00000504621 (KIF20A-005)
|
138179221-138182747 | protein_coding | ||
|
ENST00000508792 (KIF20A-002)
|
138179160-138187665 | protein_coding | ||
|
ENST00000511638 (KIF20A-003)
|
138179168-138181704 | retained_intron | ||
|
ENST00000513276 (KIF20A-004)
|
138178719-138182425 | protein_coding | ||
| CIL_0005PA_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000003779-ENSMUSG00000024370 | CGP | 10090 | 18:34624624-34651735 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000003779 (Kif20a) kinesin family member 20A |
ENSMUST00000166044 (Kif20a-201)
|
34625033-34633265 | protein_coding | |
|
ENSMUST00000167161 (Kif20a-202)
|
34624624-34633265 | protein_coding | ||
|
ENSMUSG00000024370 (Cdc23) CDC23 cell division cycle 23 |
ENSMUST00000025228 (Cdc23-001)
|
34630951-34651735 | protein_coding | |
|
ENSMUST00000133162 (Cdc23-004)
|
34636054-34651718 | retained_intron | ||
|
ENSMUST00000133181 (Cdc23-002)
|
34631683-34651735 | protein_coding | ||
|
ENSMUST00000135208 (Cdc23-003)
|
34647704-34651722 | retained_intron | ||
|
ENSMUST00000136943 (Cdc23-006)
|
34641383-34645319 | retained_intron | ||
|
ENSMUST00000136949 (Cdc23-008)
|
34636057-34637092 | retained_intron | ||
|
ENSMUST00000138400 (Cdc23-009)
|
34633678-34634630 | retained_intron | ||
|
ENSMUST00000151409 (Cdc23-005)
|
34646852-34651718 | retained_intron | ||
|
ENSMUST00000155307 (Cdc23-007)
|
34637059-34637871 | retained_intron | ||
|
ENSMUSG00000064857 (n-R5s25) nuclear encoded rRNA 5S 25 |
ENSMUST00000082923 (n-R5s25-201)
|
34647400-34647518 | rRNA | |
Expression Patterns
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