C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, AN1-type domain 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024750 Zfand5 10090 + 19:21272278-21282289 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025659 Zfand5-001 21272278-21282289 protein_coding
  ENSMUST00000133175 Zfand5-003 21276040-21280971 retained_intron
  ENSMUST00000141568 Zfand5-002 21275980-21280664 retained_intron
  ENSMUST00000149144 Zfand5-005 21272687-21280433 nonsense_mediated_decay
  ENSMUST00000152338 Zfand5-004 21273246-21277038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025659ENSMUST00000133175ENSMUST00000141568ENSMUST00000149144
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025659 16.346±6.37 168.755±37.20 36.133±1.01 31.548±9.04 36.161±16.22 50.210±7.38 20.282±1.49 13.746±3.24 14.191±2.44 40.089±10.42 70.737±13.12 67.175±29.57 27.150±1.50 4.438±0.98
ENSMUST00000133175 N/A N/A N/A N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A 2.381±0.06 N/A N/A
ENSMUST00000141568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.692±0.00
ENSMUST00000149144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W2 CIL_0000W2_0002 CGP 19:20783458-21282289
CIL_0007QU CIL_0007QU_0002 VISTA 19:20974084-21574843
CIL_0000W3 CIL_0000W3_0002 CGP 19:21272278-21473445

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0003016 IMP respiratory system process
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0010761 IMP fibroblast migration
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0048705 IMP skeletal system morphogenesis
GO:0048745 IMP smooth muscle tissue development
GO:0060324 IMP face development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000002271 zfand5b zinc finger, AN1-type domain 5b protein_coding Danio_rerio
ENSDARG00000018898 zfand5a zinc finger, AN1-type domain 5a protein_coding Danio_rerio
ENSG00000107372 ZFAND5 zinc finger, AN1-type domain 5 protein_coding Homo_sapiens

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