C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, AN1-type domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000025659 Zfand5-001 ENSMUSG00000024750 10090 + 19:21272278-21282289 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025659
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025659 16.346±6.37 168.755±37.20 36.133±1.01 31.548±9.04 36.161±16.22 50.210±7.38 20.282±1.49 13.746±3.24 14.191±2.44 40.089±10.42 70.737±13.12 67.175±29.57 27.150±1.50 4.438±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W2 CIL_0000W2_0002 CGP 19:20783458-21282289
CIL_0007QU CIL_0007QU_0002 VISTA 19:20974084-21574843
CIL_0000W3 CIL_0000W3_0002 CGP 19:21272278-21473445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0003016 IMP respiratory system process
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0010761 IMP fibroblast migration
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0048705 IMP skeletal system morphogenesis
GO:0048745 IMP smooth muscle tissue development
GO:0060324 IMP face development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237937 ZFAND5-201 protein_coding Homo_sapiens 0 1701
ENST00000343431 ZFAND5-004 protein_coding Homo_sapiens 0 1262
ENST00000376956 ZFAND5-003 protein_coding Homo_sapiens 0 798
ENST00000376960 ZFAND5-001 protein_coding Homo_sapiens 0 1792
ENST00000376962 ZFAND5-002 protein_coding Homo_sapiens 0 1701
ENST00000402892 RP1-142O9.2-001 processed_pseudogene Homo_sapiens 0 239
ENST00000471197 ZFAND5-006 processed_transcript Homo_sapiens 0 819
ENST00000487330 ZFAND5-005 processed_transcript Homo_sapiens 0 351
ENST00000488164 ZFAND5-007 processed_transcript Homo_sapiens 0 1701
ENST00000600255 CTB-50E14.5-001 processed_pseudogene Homo_sapiens 0 1026

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