C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger, AN1-type domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149144 Zfand5-005 ENSMUSG00000024750 10090 + 19:21272687-21280433 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000149144
Transcript ID Testis
ENSMUST00000149144 10.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000W2 CIL_0000W2_0002 CGP 19:20783458-21282289
CIL_0007QU CIL_0007QU_0002 VISTA 19:20974084-21574843
CIL_0000W3 CIL_0000W3_0002 CGP 19:21272278-21473445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0001944 IMP vasculature development
GO:0003016 IMP respiratory system process
GO:0003677 IEA DNA binding
GO:0008270 IEA zinc ion binding
GO:0010761 IMP fibroblast migration
GO:0048008 IMP platelet-derived growth factor receptor signaling pathway
GO:0048705 IMP skeletal system morphogenesis
GO:0048745 IMP smooth muscle tissue development
GO:0060324 IMP face development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000237937 ZFAND5-201 protein_coding Homo_sapiens 0 440
ENST00000343431 ZFAND5-004 protein_coding Homo_sapiens 0 440
ENST00000376956 ZFAND5-003 protein_coding Homo_sapiens 0 440
ENST00000376960 ZFAND5-001 protein_coding Homo_sapiens 0 453
ENST00000376962 ZFAND5-002 protein_coding Homo_sapiens 0 440
ENST00000402892 RP1-142O9.2-001 processed_pseudogene Homo_sapiens 0 239
ENST00000471197 ZFAND5-006 processed_transcript Homo_sapiens 0 219
ENST00000487330 ZFAND5-005 processed_transcript Homo_sapiens 0 276
ENST00000488164 ZFAND5-007 processed_transcript Homo_sapiens 0 440
ENST00000600255 CTB-50E14.5-001 processed_pseudogene Homo_sapiens 0 436

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