C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00095H_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm324 VISTA 9606 10:104027242-104629417
GeneTranscriptPositionBiotype
ENSG00000065613 (SLK)
STE20-like kinase 		ENST00000335753 (SLK-001) 103967201-104029233 protein_coding
ENST00000369755 (SLK-002) 103967201-104029233 protein_coding
ENST00000474260 (SLK-003) 104008198-104019116 processed_transcript
ENSG00000065618 (COL17A1)
collagen, type XVII, alpha 1 		ENST00000353479 (COL17A1-001) 104031286-104086002 protein_coding
ENST00000369733 (COL17A1-003) 104031286-104086002 protein_coding
ENST00000393211 (COL17A1-007) 104059317-104085778 protein_coding
ENST00000433822 (COL17A1-002) 104031288-104032968 protein_coding
ENST00000480127 (COL17A1-006) 104055176-104055975 processed_transcript
ENST00000483876 (COL17A1-004) 104070461-104080654 retained_intron
ENST00000488320 (COL17A1-005) 104059685-104064548 retained_intron
ENSG00000065621 (GSTO2)
glutathione S-transferase omega 2 		ENST00000338595 (GSTO2-001) 104269181-104299411 protein_coding
ENST00000369707 (GSTO2-002) 104275162-104304945 protein_coding
ENST00000450629 (GSTO2-201) 104268873-104299417 protein_coding
ENST00000467629 (GSTO2-005) 104285938-104299418 processed_transcript
ENST00000473401 (GSTO2-003) 104274898-104299414 processed_transcript
ENST00000477078 (GSTO2-004) 104274920-104291644 processed_transcript
ENST00000498052 (GSTO2-006) 104295275-104299411 retained_intron
ENSG00000148841 (ITPRIP)
inositol 1,4,5-trisphosphate receptor interacting protein 		ENST00000278071 (ITPRIP-201) 104309698-104333905 protein_coding
ENST00000337478 (ITPRIP-001) 104312131-104338404 protein_coding
ENST00000358187 (ITPRIP-002) 104312144-104328924 protein_coding
ENST00000458723 (ITPRIP-003) 104315709-104333905 protein_coding
ENSG00000156384 (SFR1)
SWI5-dependent recombination repair 1 		ENST00000369727 (SFR1-002) 104122165-104126385 protein_coding
ENST00000369729 (SFR1-001) 104122058-104126385 protein_coding
ENST00000463224 (SFR1-003) 104122058-104123363 processed_transcript
ENSG00000197748 (CFAP43)
cilia and flagella associated protein 43 		ENST00000278064 (CFAP43-003) 104167585-104232362 protein_coding
ENST00000357060 (CFAP43-201) 104129888-104232362 protein_coding
ENST00000369719 (CFAP43-006) 104203430-104232340 protein_coding
ENST00000369720 (CFAP43-005) 104192494-104232305 protein_coding
ENST00000434629 (CFAP43-007) 104129934-104186065 protein_coding
ENST00000457071 (CFAP43-002) 104129889-104161122 protein_coding
ENST00000479392 (CFAP43-004) 104133454-104142315 processed_transcript
ENSG00000225768 (RP11-127O4.3)
 ENST00000447860 (RP11-127O4.3-001) 104474939-104480274 lincRNA
ENSG00000228261 (RP11-127L20.3)
 ENST00000434792 (RP11-127L20.3-001) 104323369-104327004 lincRNA
ENSG00000231233 (CCDC147-AS1)
CCDC147 antisense RNA 1 (head to head) 		ENST00000435434 (CCDC147-AS1-001) 104351591-104353575 antisense
ENSG00000237761 (RP11-127O4.2)
 ENST00000450054 (RP11-127O4.2-001) 104616102-104616973 lincRNA
ENSG00000266852 (MIR4482)
microRNA 4482 		ENST00000583050 (MIR4482-201) 104268336-104268405 miRNA
CIL_00095H_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm324 VISTA 10090 19:47608459-48210596
GeneTranscriptPositionBiotype
ENSMUSG00000025060 (Slk)
STE20-like kinase 		ENSMUST00000026043 (Slk-001) 47579678-47645246 protein_coding
ENSMUST00000051691 (Slk-002) 47580019-47642455 protein_coding
ENSMUST00000123816 (Slk-003) 47620670-47625354 retained_intron
ENSMUST00000130115 (Slk-005) 47622658-47625854 retained_intron
ENSMUST00000147841 (Slk-004) 47635130-47636454 retained_intron
ENSMUSG00000025064 (Col17a1)
collagen, type XVII, alpha 1 		ENSMUST00000026045 (Col17a1-001) 47646344-47692094 protein_coding
ENSMUST00000086923 (Col17a1-004) 47646344-47692094 protein_coding
ENSMUST00000145254 (Col17a1-002) 47669283-47671048 processed_transcript
ENSMUST00000151102 (Col17a1-003) 47648100-47649595 processed_transcript
ENSMUSG00000025066 (Sfr1)
SWI5 dependent recombination repair 1 		ENSMUST00000099353 (Sfr1-201) 47731756-47735588 protein_coding
ENSMUSG00000025068 (Gsto1)
glutathione S-transferase omega 1 		ENSMUST00000026050 (Gsto1-001) 47854970-47864790 protein_coding
ENSMUST00000130157 (Gsto1-002) 47855083-47855725 retained_intron
ENSMUST00000143694 (Gsto1-003) 47862995-47864567 retained_intron
ENSMUSG00000025069 (Gsto2)
glutathione S-transferase omega 2 		ENSMUST00000056159 (Gsto2-001) 47865767-47886324 protein_coding
ENSMUST00000120645 (Gsto2-002) 47865545-47886324 protein_coding
ENSMUST00000135016 (Gsto2-003) 47870262-47884704 protein_coding
ENSMUSG00000046585 (Ccdc147)
cilia and flagella associated protein 58 		ENSMUST00000066308 (Ccdc147-201) 47937712-48035379 protein_coding
ENSMUSG00000063434 (Sorcs3)
sortilin-related VPS10 domain containing receptor 3 		ENSMUST00000078880 (Sorcs3-201) 48206025-48805505 protein_coding
ENSMUSG00000086121 (Gm16068)
predicted gene 16068 		ENSMUST00000136557 (Gm16068-001) 47606144-47617106 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00095H_0001ENSG00000065613ENST00000335753ENST00000369755ENST00000474260ENSG00000065618ENST00000353479ENST00000369733ENST00000393211ENST00000433822ENST00000480127ENST00000483876ENST00000488320ENSG00000065621ENST00000338595ENST00000369707ENST00000450629ENST00000467629ENST00000473401ENST00000477078ENST00000498052ENSG00000148841ENST00000278071ENST00000337478ENST00000358187ENST00000458723ENSG00000156384ENST00000369727ENST00000369729ENST00000463224ENSG00000197748ENST00000278064ENST00000357060ENST00000369719ENST00000369720ENST00000434629ENST00000457071ENST00000479392ENSG00000225768ENST00000447860ENSG00000228261ENST00000434792ENSG00000231233ENST00000435434ENSG00000237761ENST00000450054ENSG00000266852ENST00000583050CIL_00095H_0002ENSMUSG00000025060ENSMUST00000026043ENSMUST00000051691ENSMUST00000123816ENSMUST00000130115ENSMUST00000147841ENSMUSG00000025064ENSMUST00000026045ENSMUST00000086923ENSMUST00000145254ENSMUST00000151102ENSMUSG00000025066ENSMUST00000099353ENSMUSG00000025068ENSMUST00000026050ENSMUST00000130157ENSMUST00000143694ENSMUSG00000025069ENSMUST00000056159ENSMUST00000120645ENSMUST00000135016ENSMUSG00000046585ENSMUST00000066308ENSMUSG00000063434ENSMUST00000078880ENSMUSG00000086121ENSMUST00000136557
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065613 ENST00000335753 12.210±0.00 6.987±0.00 0.751±0.00 6.474±1.63 5.766±0.30 7.243±4.25 5.824±2.73 2.157±0.71 6.038±5.27 8.534±1.14 4.977±3.70 6.953±1.35 5.223±2.49 9.529±1.67
ENST00000369755 N/A N/A 3.013±0.00 1.450±0.00 1.240±0.00 2.765±0.00 N/A 5.505±2.72 2.315±0.73 1.803±0.00 N/A 6.084±4.07 2.493±1.17 2.447±0.00
ENST00000474260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000065618 ENST00000353479 0.187±0.00 0.309±0.00 N/A N/A 5.257±3.70 1.084±0.88 0.009±0.00 0.068±0.00 N/A 0.401±0.22 N/A 8.332±9.30 79.100±37.15 3.781±0.00
ENST00000369733 0.089±0.00 N/A 0.060±0.00 0.162±0.00 N/A 1.912±1.52 0.052±0.00 0.073±0.00 0.842±0.00 N/A N/A 1.065±1.03 N/A N/A
ENST00000393211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.676±0.00 N/A N/A
ENST00000433822 N/A 0.501±0.00 N/A N/A N/A 0.876±0.00 N/A 0.469±0.00 0.057±0.00 N/A N/A 14.917±10.79 125.098±0.00 11.924±9.95
ENST00000480127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488320 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000065621 ENST00000338595 N/A N/A N/A 1.340±0.00 2.677±0.00 0.702±0.00 N/A 3.985±0.00 N/A 1.273±0.00 0.286±0.26 2.335±1.38 1.015±0.49 8.753±0.21
ENST00000369707 0.036±0.00 0.195±0.00 N/A 0.265±0.08 N/A 0.158±0.00 0.032±0.01 0.646±0.57 0.041±0.01 0.218±0.11 0.076±0.00 0.567±0.28 0.320±0.04 0.516±0.00
ENST00000450629 N/A N/A N/A N/A N/A N/A N/A N/A 0.747±0.00 N/A 0.028±0.00 N/A N/A 1.949±0.00
ENST00000467629 N/A N/A N/A N/A N/A 1.675±0.00 N/A N/A N/A 0.936±0.00 N/A N/A N/A N/A
ENST00000473401 N/A N/A N/A N/A N/A N/A N/A 3.716±0.00 N/A N/A N/A 2.058±0.00 N/A N/A
ENST00000477078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.300±0.00 N/A N/A N/A
ENST00000498052 N/A 0.247±0.00 N/A N/A 0.645±0.08 0.207±0.09 0.057±0.00 0.651±0.00 0.154±0.00 N/A 0.013±0.00 0.529±0.18 N/A 0.996±0.00
ENSG00000148841 ENST00000278071 N/A N/A N/A 0.038±0.00 N/A N/A 1.630±0.00 N/A N/A N/A N/A 0.996±0.00 1.518±0.00 N/A
ENST00000337478 31.495±0.00 9.610±0.00 0.172±0.00 2.439±0.00 2.836±2.14 11.630±0.00 13.834±0.00 6.205±0.00 1.798±1.17 28.661±28.15 5.143±0.00 5.615±2.58 7.881±3.99 10.605±0.00
ENST00000358187 N/A N/A N/A 0.460±0.00 N/A 2.512±1.77 N/A 0.173±0.00 N/A N/A 0.749±0.00 13.893±0.00 3.961±1.35 5.789±0.00
ENST00000458723 N/A N/A N/A 0.115±0.00 N/A N/A N/A 0.908±0.00 N/A N/A 2.391±0.00 N/A N/A N/A
ENSG00000156384 ENST00000369727 1.254±0.00 2.379±0.00 0.501±0.00 2.343±0.12 1.405±0.56 1.500±0.55 N/A 0.578±0.00 0.450±0.00 0.280±0.00 0.839±0.83 2.478±1.58 0.563±0.42 2.221±1.56
ENST00000369729 1.184±0.00 N/A N/A N/A 0.850±0.00 N/A 0.836±0.27 1.621±0.00 1.067±0.00 1.439±0.00 0.017±0.00 2.662±0.49 0.525±0.37 3.351±1.10
ENST00000463224 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197748 ENST00000278064 0.012±0.00 N/A N/A N/A 0.168±0.00 0.074±0.00 N/A N/A N/A 2.099±0.00 N/A 0.263±0.00 0.029±0.00 N/A
ENST00000357060 N/A N/A N/A 0.179±0.05 0.028±0.00 N/A N/A N/A N/A N/A N/A 0.510±0.42 0.036±0.00 N/A
ENST00000369719 N/A N/A N/A N/A 0.112±0.00 N/A 0.039±0.00 0.468±0.00 N/A N/A N/A 0.640±0.00 0.086±0.00 N/A
ENST00000369720 N/A 0.053±0.00 N/A 0.169±0.00 N/A 0.086±0.00 0.009±0.00 N/A 0.097±0.00 0.952±0.00 N/A 0.196±0.00 N/A N/A
ENST00000434629 N/A 0.043±0.00 N/A 0.158±0.00 N/A 0.032±0.01 0.008±0.00 N/A 0.021±0.01 0.809±0.00 N/A 0.533±0.16 0.017±0.01 13.912±4.78
ENST00000457071 0.037±0.00 N/A N/A 0.150±0.00 N/A N/A 0.041±0.00 0.015±0.00 0.061±0.00 1.699±0.00 N/A 1.700±1.55 0.020±0.00 N/A
ENST00000479392 N/A 0.084±0.00 N/A N/A N/A N/A 0.065±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000225768 ENST00000447860 0.037±0.00 0.026±0.00 N/A N/A 0.050±0.00 N/A N/A N/A 0.081±0.00 N/A N/A 0.025±0.00 N/A 0.057±0.00
ENSG00000228261 ENST00000434792 0.073±0.00 0.039±0.00 0.304±0.00 0.099±0.03 0.184±0.02 N/A 0.054±0.00 0.040±0.00 0.152±0.00 N/A N/A 0.043±0.00 0.029±0.00 0.083±0.07
ENSG00000231233 ENST00000435434 0.153±0.00 0.181±0.00 0.385±0.00 0.858±0.60 0.032±0.00 0.089±0.00 0.048±0.00 0.097±0.00 0.057±0.00 0.700±0.00 0.294±0.00 0.249±0.20 0.167±0.05 0.562±0.02
ENSG00000237761 ENST00000450054 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.323±0.12
ENSG00000266852 ENST00000583050 N/A N/A N/A N/A N/A N/A N/A 3.113±0.00 1.009±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025060 ENSMUST00000026043 5.092±2.90 N/A 16.421±0.95 6.660±1.28 2.823±1.23 9.040±0.45 5.546±2.73 2.167±0.27 9.396±4.08 10.430±4.50 5.231±0.80 8.416±1.86 8.383±2.86 1.642±0.74
ENSMUST00000051691 N/A N/A N/A 13.920±0.00 N/A N/A N/A N/A 2.496±0.65 N/A N/A 7.388±4.89 22.411±14.38 4.259±5.47
ENSMUST00000123816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147841 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025064 ENSMUST00000026045 0.151±0.01 0.013±0.00 1.124±0.07 0.346±0.07 4.813±2.12 0.078±0.02 0.084±0.06 0.125±0.00 0.045±0.02 2.197±1.13 0.144±0.11 0.182±0.08 0.050±0.01 0.530±0.06
ENSMUST00000086923 N/A 0.011±0.01 0.557±0.08 0.152±0.05 2.729±0.55 0.052±0.01 0.103±0.07 0.053±0.02 0.047±0.01 1.324±0.00 0.059±0.03 0.144±0.06 0.148±0.10 0.311±0.08
ENSMUST00000145254 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151102 N/A 0.059±0.00 N/A N/A N/A 0.227±0.05 0.065±0.00 0.114±0.05 0.078±0.01 N/A N/A 0.564±0.19 N/A N/A
ENSMUSG00000025066 ENSMUST00000099353 39.440±18.65 44.297±4.04 31.623±2.78 50.327±16.73 46.690±13.47 27.300±3.19 26.876±10.01 26.978±10.20 21.917±8.39 28.775±11.86 17.498±6.55 56.790±25.57 49.294±27.65 26.042±5.90
ENSMUSG00000025068 ENSMUST00000026050 78.487±33.20 30.870±2.39 218.169±22.44 20.517±5.47 29.067±4.77 125.982±5.06 63.989±12.54 42.498±0.86 59.139±6.04 73.221±17.14 27.041±3.10 76.442±26.33 49.687±24.23 1.864±0.70
ENSMUST00000130157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143694 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.936±0.04
ENSMUSG00000025069 ENSMUST00000056159 0.692±0.28 N/A 1.480±0.74 0.555±0.17 0.524±0.15 0.477±0.00 0.577±0.00 0.935±0.24 0.107±0.03 0.614±0.00 0.102±0.00 0.749±0.22 0.981±1.11 82.210±25.47
ENSMUST00000120645 0.696±0.00 0.254±0.11 1.001±0.21 0.214±0.00 1.022±0.55 0.243±0.17 0.351±0.00 0.487±0.40 0.127±0.08 0.575±0.19 0.128±0.02 0.410±0.22 0.877±0.44 76.207±26.11
ENSMUST00000135016 N/A 0.101±0.00 N/A N/A 0.274±0.05 0.100±0.00 N/A N/A 0.066±0.03 N/A 0.109±0.08 0.160±0.00 N/A N/A
ENSMUSG00000046585 ENSMUST00000066308 N/A N/A 0.004±0.00 0.140±0.12 N/A N/A 0.024±0.01 0.026±0.02 0.009±0.00 0.400±0.12 N/A 0.586±0.91 0.100±0.04 58.960±69.33
ENSMUSG00000063434 ENSMUST00000078880 0.050±0.02 N/A 0.002±0.00 4.857±1.97 0.013±0.00 0.026±0.02 0.013±0.01 0.321±0.05 0.024±0.01 0.009±0.00 0.008±0.00 0.287±0.13 0.015±0.00 0.066±0.02
ENSMUSG00000086121 ENSMUST00000136557 N/A N/A 0.051±0.03 0.141±0.09 N/A 0.202±0.00 0.131±0.04 0.093±0.00 0.201±0.12 0.239±0.00 N/A N/A 0.140±0.01 0.151±0.05

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