C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hepatoma-derived growth factor, related protein 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025104 Hdgfrp3 10090 - 7:81881251-81934473 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026094 Hdgfrp3-002 81891974-81934459 protein_coding
  ENSMUST00000107305 Hdgfrp3-001 81881251-81934473 protein_coding
  ENSMUST00000149288 Hdgfrp3-003 81897811-81934023 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026094ENSMUST00000107305
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026094 3.533±0.34 5.041±2.33 N/A N/A N/A 1.556±0.38 N/A N/A N/A N/A N/A 8.745±2.84 N/A 2.573±1.49
ENSMUST00000107305 4.718±0.71 1.617±0.00 3.865±0.52 27.497±7.66 3.490±0.91 1.484±0.24 1.303±0.38 1.586±0.27 0.639±0.50 4.020±0.39 0.798±0.23 4.518±1.67 0.733±0.49 2.334±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L6 CIL_0001L6_0002 CGP 7:81859001-81934473
CIL_00037Q CIL_00037Q_0002 CGP 7:81881251-81992299

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003682 NAS chromatin binding
GO:0005634 ISS nucleus
GO:0005737 IDA cytoplasm
GO:0008083 IEA growth factor activity
GO:0008283 ISS cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074354 CABZ01088864.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000166503 HDGFRP3 Hepatoma-derived growth factor-related protein 3 protein_coding Homo_sapiens

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