C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 45
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025145 Lrrc45 10090 + 11:120713925-120721128 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000026139 Lrrc45-001 120713925-120721128 protein_coding
  ENSMUST00000145781 Lrrc45-002 120713951-120721123 nonsense_mediated_decay
  ENSMUST00000150225 Lrrc45-004 120717515-120719972 retained_intron
  ENSMUST00000151852 Lrrc45-003 120713978-120715554 protein_coding
  ENSMUST00000155187 Lrrc45-005 120719731-120720912 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000026139ENSMUST00000145781ENSMUST00000150225ENSMUST00000155187
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000026139 5.400±2.23 2.215±0.00 9.147±1.74 13.318±6.68 3.960±0.83 5.350±2.11 1.015±0.46 2.775±0.79 2.942±1.57 9.596±0.00 1.391±0.52 20.400±23.69 5.995±4.17 2.858±2.22
ENSMUST00000145781 4.328±1.73 4.682±0.00 6.750±1.62 27.824±7.28 4.177±1.07 3.721±0.82 0.642±0.15 2.538±1.18 1.361±0.38 N/A 1.023±0.29 11.378±1.15 0.972±0.13 1.397±0.40
ENSMUST00000150225 9.834±4.74 10.764±3.96 13.211±0.07 21.185±5.37 7.553±0.89 9.588±1.80 2.007±0.64 3.647±0.60 2.841±0.85 N/A 1.292±0.30 21.633±4.70 2.789±0.78 2.227±0.39
ENSMUST00000155187 N/A N/A N/A N/A N/A N/A N/A 3.549±0.54 1.205±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VR CIL_0004VR_0002 CGP 11:120710942-120721128
CIL_0004VQ CIL_0004VQ_0002 CGP 11:120713925-120723969

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005813 IEA centrosome
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000169683 LRRC45 leucine rich repeat containing 45 protein_coding Homo_sapiens

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