C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: leucine rich repeat containing 45
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000169683 LRRC45 9606 + 17:82023302-82031151 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000306688 LRRC45-001 82023302-82031151 protein_coding
  ENST00000577638 LRRC45-003 82023922-82025440 protein_coding
  ENST00000581227 LRRC45-005 82027007-82030632 nonsense_mediated_decay
  ENST00000582083 LRRC45-006 82028741-82030146 retained_intron
  ENST00000583302 LRRC45-004 82026806-82029232 retained_intron
  ENST00000583383 LRRC45-002 82023321-82025425 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000306688ENST00000577638ENST00000581227ENST00000582083ENST00000583302
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000306688 2.121±0.00 3.868±0.00 0.106±0.00 1.475±0.58 4.458±0.00 2.270±1.52 0.968±0.82 2.955±2.08 2.352±2.01 4.259±0.00 1.276±0.00 4.674±2.71 6.377±1.14 3.389±0.66
ENST00000577638 N/A N/A 0.388±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000581227 N/A N/A N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A 0.061±0.00 N/A N/A N/A
ENST00000582083 N/A N/A 0.578±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583302 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.358±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VS CIL_0004VS_0001 CGP 17:81976807-82024107
CIL_0004VR CIL_0004VR_0001 CGP 17:82018702-82031151
CIL_0004VQ CIL_0004VQ_0001 CGP 17:82023302-82034204

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005813 IDA centrosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000025145 Lrrc45 leucine rich repeat containing 45 protein_coding Mus_musculus

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