C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich repeat containing 45
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000145781 Lrrc45-002 ENSMUSG00000025145 10090 + 11:120713951-120721123 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000145781
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000145781 4.328±1.73 4.682±0.00 6.750±1.62 27.824±7.28 4.177±1.07 3.721±0.82 0.642±0.15 2.538±1.18 1.361±0.38 1.023±0.29 11.378±1.15 0.972±0.13 1.397±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004VR CIL_0004VR_0002 CGP 11:120710942-120721128
CIL_0004VQ CIL_0004VQ_0002 CGP 11:120713925-120723969

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000306688 LRRC45-001 protein_coding Homo_sapiens 0 1314
ENST00000577638 LRRC45-003 protein_coding Homo_sapiens 0 462
ENST00000583383 LRRC45-002 processed_transcript Homo_sapiens 0 387

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