C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein, large P2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025508 Rplp2 10090 + 7:141447370-141451585 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000084434 Rplp2-001 141447370-141451585 protein_coding
  ENSMUST00000106003 Rplp2-005 141447850-141451350 protein_coding
  ENSMUST00000106004 Rplp2-004 141447712-141451350 protein_coding
  ENSMUST00000134636 Rplp2-006 141450822-141451349 processed_transcript
  ENSMUST00000137307 Rplp2-003 141447669-141449027 retained_intron
  ENSMUST00000140099 Rplp2-002 141447631-141448616 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084434ENSMUST00000106003ENSMUST00000106004ENSMUST00000137307ENSMUST00000140099
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084434 163.695±7.42 72.969±17.06 307.758±162.65 195.307±36.08 188.352±63.04 171.075±18.29 45.794±10.00 81.197±41.89 295.284±282.25 126.952±33.67 30.764±11.03 345.505±110.22 102.965±49.34 56.749±5.39
ENSMUST00000106003 127.998±2.16 47.404±1.51 N/A N/A 115.377±35.56 77.311±0.00 N/A N/A 27.243±0.00 90.596±0.00 N/A N/A N/A N/A
ENSMUST00000106004 N/A N/A 571.669±0.00 236.284±95.90 52.356±30.82 130.119±23.33 120.949±25.61 171.480±42.83 106.442±87.03 174.878±48.50 215.540±40.93 832.578±497.17 603.411±349.94 137.461±97.85
ENSMUST00000137307 119.735±31.74 59.512±14.91 366.258±0.00 82.877±0.00 154.410±105.47 94.002±16.86 109.996±33.36 183.552±27.53 70.092±17.87 88.101±19.99 69.113±14.40 57.955±0.00 194.855±0.00 84.661±5.47
ENSMUST00000140099 N/A N/A N/A N/A 2.583±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EP CIL_0003EP_0002 CGP 7:141438113-141451585
CIL_0003EM CIL_0003EM_0002 CGP 7:141447370-141460743

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0005925 IEA focal adhesion
GO:0006414 IEA translational elongation
GO:0016020 IEA membrane
GO:0022625 IEA cytosolic large ribosomal subunit
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011201 rplp2l ribosomal protein, large P2, like protein_coding Danio_rerio
ENSG00000177600 RPLP2 ribosomal protein, large, P2 protein_coding Homo_sapiens

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