C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003EM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177600-ENSG00000177666 CGP 9606 11:809647-825573
GeneTranscriptPositionBiotype
ENSG00000177600 (RPLP2)
ribosomal protein, large, P2 		ENST00000321153 (RPLP2-001) 809647-812875 protein_coding
ENST00000524867 (RPLP2-003) 810003-811839 retained_intron
ENST00000525722 (RPLP2-005) 811372-812875 retained_intron
ENST00000526222 (RPLP2-008) 810398-812861 processed_transcript
ENST00000527517 (RPLP2-007) 812079-812850 retained_intron
ENST00000530398 (RPLP2-009) 810269-812871 protein_coding
ENST00000530797 (RPLP2-002) 809984-812874 protein_coding
ENST00000532004 (RPLP2-004) 809965-812880 processed_transcript
ENSG00000177666 (PNPLA2)
patatin-like phospholipase domain containing 2 		ENST00000336615 (PNPLA2-001) 818902-825573 protein_coding
ENST00000525250 (PNPLA2-002) 820835-825219 retained_intron
ENST00000526083 (PNPLA2-006) 823648-824437 retained_intron
ENST00000529255 (PNPLA2-003) 823543-825218 retained_intron
ENST00000531923 (PNPLA2-007) 822016-823572 retained_intron
ENST00000534561 (PNPLA2-005) 821774-822258 retained_intron
ENST00000617551 (PNPLA2-201) 820835-825219 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0003EM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025508-ENSMUSG00000025509 CGP 10090 7:141447370-141460743
GeneTranscriptPositionBiotype
ENSMUSG00000025508 (Rplp2)
ribosomal protein, large P2 		ENSMUST00000084434 (Rplp2-001) 141447370-141451585 protein_coding
ENSMUST00000106003 (Rplp2-005) 141447850-141451350 protein_coding
ENSMUST00000106004 (Rplp2-004) 141447712-141451350 protein_coding
ENSMUST00000134636 (Rplp2-006) 141450822-141451349 processed_transcript
ENSMUST00000137307 (Rplp2-003) 141447669-141449027 retained_intron
ENSMUST00000140099 (Rplp2-002) 141447631-141448616 retained_intron
ENSMUSG00000025509 (Pnpla2)
patatin-like phospholipase domain containing 2 		ENSMUST00000026583 (Pnpla2-002) 141455206-141460092 nonsense_mediated_decay
ENSMUST00000064151 (Pnpla2-005) 141455207-141460094 protein_coding
ENSMUST00000164016 (Pnpla2-001) 141455198-141460743 protein_coding
ENSMUST00000164924 (Pnpla2-003) 141455229-141460103 nonsense_mediated_decay
ENSMUST00000165487 (Pnpla2-007) 141455607-141458151 protein_coding
ENSMUST00000169665 (Pnpla2-006) 141455219-141458938 protein_coding
ENSMUST00000169723 (Pnpla2-008) 141457018-141458686 nonsense_mediated_decay

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EM_0001ENSG00000177600ENST00000321153ENST00000524867ENST00000525722ENST00000526222ENST00000527517ENST00000530398ENST00000530797ENST00000532004ENSG00000177666ENST00000336615ENST00000525250ENST00000526083ENST00000529255ENST00000531923ENST00000534561ENST00000617551CIL_0003EM_0002ENSMUSG00000025508ENSMUST00000084434ENSMUST00000106003ENSMUST00000106004ENSMUST00000134636ENSMUST00000137307ENSMUST00000140099ENSMUSG00000025509ENSMUST00000026583ENSMUST00000064151ENSMUST00000164016ENSMUST00000164924ENSMUST00000165487ENSMUST00000169665ENSMUST00000169723
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003EM_0001ENSG00000177600ENST00000321153ENST00000530398ENST00000530797ENSG00000177666ENST00000336615ENST00000529255CIL_0003EM_0002ENSMUSG00000025508ENSMUST00000084434ENSMUST00000106003ENSMUST00000106004ENSMUST00000137307ENSMUST00000140099ENSMUSG00000025509ENSMUST00000026583ENSMUST00000064151ENSMUST00000164016ENSMUST00000164924ENSMUST00000165487ENSMUST00000169665ENSMUST00000169723
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000177600 ENST00000321153 257.176±0.00 247.048±0.00 121.357±0.00 137.215±0.00 220.656±13.91 257.965±55.17 89.176±17.06 246.409±0.00 221.867±43.41 366.945±161.25 464.096±115.92 575.205±283.00 391.893±103.77 141.425±0.00
ENST00000524867 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525722 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526222 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530398 N/A N/A N/A 84.980±0.00 198.598±0.00 179.499±0.00 N/A N/A N/A 148.796±0.00 120.904±0.00 N/A N/A N/A
ENST00000530797 1864.510±0.00 2112.120±0.00 N/A 273.673±0.00 1570.340±0.00 1144.800±0.00 145.277±113.10 754.997±0.00 418.279±0.00 1514.410±0.00 1255.400±0.00 1869.183±396.41 1047.604±157.75 612.665±224.79
ENST00000532004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177666 ENST00000336615 307.125±0.00 N/A 2.199±0.00 8.328±6.94 222.592±218.45 23.615±17.68 46.776±44.17 32.478±0.00 4.615±0.00 3.521±0.00 7.728±0.00 23.082±20.00 35.663±0.28 28.220±5.28
ENST00000525250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529255 296.347±0.00 N/A N/A N/A 458.293±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025508 ENSMUST00000084434 163.695±7.42 72.969±17.06 307.758±162.65 195.307±36.08 188.352±63.04 171.075±18.29 45.794±10.00 81.197±41.89 295.284±282.25 126.952±33.67 30.764±11.03 345.505±110.22 102.965±49.34 56.749±5.39
ENSMUST00000106003 127.998±2.16 47.404±1.51 N/A N/A 115.377±35.56 77.311±0.00 N/A N/A 27.243±0.00 90.596±0.00 N/A N/A N/A N/A
ENSMUST00000106004 N/A N/A 571.669±0.00 236.284±95.90 52.356±30.82 130.119±23.33 120.949±25.61 171.480±42.83 106.442±87.03 174.878±48.50 215.540±40.93 832.578±497.17 603.411±349.94 137.461±97.85
ENSMUST00000134636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137307 119.735±31.74 59.512±14.91 366.258±0.00 82.877±0.00 154.410±105.47 94.002±16.86 109.996±33.36 183.552±27.53 70.092±17.87 88.101±19.99 69.113±14.40 57.955±0.00 194.855±0.00 84.661±5.47
ENSMUST00000140099 N/A N/A N/A N/A 2.583±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025509 ENSMUST00000026583 388.518±205.12 99.277±25.75 28.513±1.17 1.994±0.25 194.235±93.98 19.122±4.55 82.251±19.69 47.639±3.49 3.896±1.83 20.673±1.17 50.252±2.64 34.206±30.74 6.759±4.56 43.808±20.33
ENSMUST00000064151 449.234±234.33 379.087±108.42 25.946±0.42 3.762±0.69 606.689±108.01 65.009±8.33 112.153±39.30 80.373±7.60 12.854±8.32 75.993±25.12 22.209±3.63 66.129±5.95 6.208±3.29 91.411±8.16
ENSMUST00000164016 66.328±1.01 59.387±23.80 N/A N/A 108.075±5.14 10.788±0.22 16.707±0.00 N/A 0.899±0.26 31.804±9.06 N/A 10.816±3.39 N/A N/A
ENSMUST00000164924 N/A N/A N/A 1.212±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.676±0.00 N/A
ENSMUST00000165487 N/A N/A N/A N/A 804.421±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169665 N/A N/A N/A 1.795±0.00 N/A N/A N/A N/A N/A N/A 27.719±4.68 9.408±0.00 4.431±2.67 10.876±0.00
ENSMUST00000169723 N/A N/A N/A N/A 198.217±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

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