C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large P2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106003 Rplp2-005 ENSMUSG00000025508 10090 + 7:141447850-141451350 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungENSMUST00000106003
Transcript ID Adipose Adrenal Breast Colon Liver Lung
ENSMUST00000106003 127.998±2.16 47.404±1.51 115.377±35.56 77.311±0.00 27.243±0.00 90.596±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EP CIL_0003EP_0002 CGP 7:141438113-141451585
CIL_0003EM CIL_0003EM_0002 CGP 7:141447370-141460743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321153 RPLP2-001 protein_coding Homo_sapiens 0 503
ENST00000398220 RPLP2P1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000460082 CTB-47B8.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000474540 RP11-832N8.1-001 processed_pseudogene Homo_sapiens 0 379
ENST00000525722 RPLP2-005 retained_intron Homo_sapiens 0 357
ENST00000526222 RPLP2-008 processed_transcript Homo_sapiens 0 344
ENST00000527517 RPLP2-007 retained_intron Homo_sapiens 0 270
ENST00000530398 RPLP2-009 protein_coding Homo_sapiens 0 353
ENST00000530797 RPLP2-002 protein_coding Homo_sapiens 0 503
ENST00000532004 RPLP2-004 processed_transcript Homo_sapiens 0 355

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