C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein, large P2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106004 Rplp2-004 ENSMUSG00000025508 10090 + 7:141447712-141451350 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106004
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106004 571.669±0.00 236.284±95.90 52.356±30.82 130.119±23.33 120.949±25.61 171.480±42.83 106.442±87.03 174.878±48.50 215.540±40.93 832.578±497.17 603.411±349.94 137.461±97.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EP CIL_0003EP_0002 CGP 7:141438113-141451585
CIL_0003EM CIL_0003EM_0002 CGP 7:141447370-141460743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003735 IEA structural constituent of ribosome
GO:0006414 IEA translational elongation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000321153 RPLP2-001 protein_coding Homo_sapiens 0 503
ENST00000398220 RPLP2P1-001 processed_pseudogene Homo_sapiens 0 200
ENST00000460082 CTB-47B8.1-001 processed_pseudogene Homo_sapiens 0 313
ENST00000474540 RP11-832N8.1-001 processed_pseudogene Homo_sapiens 0 379
ENST00000525722 RPLP2-005 retained_intron Homo_sapiens 0 357
ENST00000526222 RPLP2-008 processed_transcript Homo_sapiens 0 344
ENST00000527517 RPLP2-007 retained_intron Homo_sapiens 0 270
ENST00000530398 RPLP2-009 protein_coding Homo_sapiens 0 353
ENST00000530797 RPLP2-002 protein_coding Homo_sapiens 0 503
ENST00000532004 RPLP2-004 processed_transcript Homo_sapiens 0 355

Loading