C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 5A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136197 Slco5a1-003 ENSMUSG00000025938 10090 - 1:12878595-12991135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungOvaryENSMUST00000136197
Transcript ID Adipose Adrenal Breast Colon Liver Lung Ovary
ENSMUST00000136197 0.105±0.09 0.041±0.00 0.305±0.11 0.040±0.01 0.005±0.00 0.110±0.00 0.145±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087Y CIL_00087Y_0002 VISTA 1:12314812-12917322
CIL_0001S3 CIL_0001S3_0003 CGP 1:12692277-12992650
CIL_0003BE CIL_0003BE_0002 CGP 1:12866549-13127163

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000260126 SLCO5A1-001 protein_coding Homo_sapiens 0 1995
ENST00000524945 SLCO5A1-004 protein_coding Homo_sapiens 0 2010
ENST00000526750 SLCO5A1-005 nonsense_mediated_decay Homo_sapiens 0 867
ENST00000528658 SLCO5A1-002 processed_transcript Homo_sapiens 0 1051
ENST00000530307 SLCO5A1-006 protein_coding Homo_sapiens 0 1195
ENST00000532388 SLCO5A1-003 retained_intron Homo_sapiens 0 1282

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