C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: IKAROS family zinc finger 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000025997 Ikzf2 10090 - 1:69531214-69687245 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027146 Ikzf2-001 69531214-69685821 protein_coding
  ENSMUST00000187184 Ikzf2-003 69538582-69687245 protein_coding
  ENSMUST00000187870 Ikzf2-004 69681558-69684536 retained_intron
  ENSMUST00000188110 Ikzf2-007 69538768-69684157 protein_coding
  ENSMUST00000188919 Ikzf2-002 69681559-69687140 retained_intron
  ENSMUST00000190016 Ikzf2-010 69577890-69685300 protein_coding
  ENSMUST00000190771 Ikzf2-005 69538037-69685886 protein_coding
  ENSMUST00000190855 Ikzf2-006 69538768-69684157 protein_coding
  ENSMUST00000191262 Ikzf2-009 69538768-69684157 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027146ENSMUST00000187184ENSMUST00000188110ENSMUST00000190016ENSMUST00000190771ENSMUST00000191262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027146 0.491±0.22 0.200±0.00 5.840±0.74 0.457±0.30 1.020±0.36 0.580±0.13 0.212±0.08 0.290±0.11 0.090±0.06 0.789±0.21 0.176±0.02 0.618±0.11 0.089±0.05 0.103±0.00
ENSMUST00000187184 N/A N/A N/A N/A N/A 0.335±0.00 N/A N/A 0.026±0.00 N/A N/A 0.658±0.37 N/A 0.089±0.04
ENSMUST00000188110 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A
ENSMUST00000190016 N/A N/A N/A N/A N/A N/A 3.020±0.00 N/A N/A N/A N/A 4.060±0.55 N/A N/A
ENSMUST00000190771 0.235±0.00 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.439±0.14 N/A N/A
ENSMUST00000191262 N/A 0.312±0.02 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A 0.411±0.00 0.164±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PA CIL_0006PA_0002 CGP 1:68032186-69687245
CIL_0006PB CIL_0006PB_0002 CGP 1:69531214-70725132

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IPI protein homodimerization activity
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069111 IKZF2 IKAROS family zinc finger 2 (Helios) protein_coding Danio_rerio
ENSG00000030419 IKZF2 IKAROS family zinc finger 2 (Helios) protein_coding Homo_sapiens

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