C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027146 Ikzf2-001 ENSMUSG00000025997 10090 - 1:69531214-69685821 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027146
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027146 0.491±0.22 0.200±0.00 5.840±0.74 0.457±0.30 1.020±0.36 0.580±0.13 0.212±0.08 0.290±0.11 0.090±0.06 0.789±0.21 0.176±0.02 0.618±0.11 0.089±0.05 0.103±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PA CIL_0006PA_0002 CGP 1:68032186-69687245
CIL_0006PB CIL_0006PB_0002 CGP 1:69531214-70725132

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0042803 IPI protein homodimerization activity
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000342002 IKZF2-002 protein_coding Homo_sapiens 0 3482
ENST00000374319 IKZF2-003 protein_coding Homo_sapiens 0 2047
ENST00000374326 IKZF2-009 nonsense_mediated_decay Homo_sapiens 0 1906
ENST00000374327 IKZF2-201 protein_coding Homo_sapiens 0 1633
ENST00000412444 IKZF2-006 nonsense_mediated_decay Homo_sapiens 0 2348
ENST00000413091 IKZF2-202 protein_coding Homo_sapiens 0 1413
ENST00000421754 IKZF2-203 protein_coding Homo_sapiens 0 913
ENST00000431520 IKZF2-011 nonsense_mediated_decay Homo_sapiens 0 1411
ENST00000433134 IKZF2-014 protein_coding Homo_sapiens 0 534
ENST00000434687 IKZF2-001 protein_coding Homo_sapiens 0 3644
ENST00000439848 IKZF2-008 nonsense_mediated_decay Homo_sapiens 0 1906
ENST00000442445 IKZF2-004 protein_coding Homo_sapiens 0 230
ENST00000451136 IKZF2-204 protein_coding Homo_sapiens 0 2102
ENST00000452786 IKZF2-013 protein_coding Homo_sapiens 0 396
ENST00000453575 IKZF2-005 nonsense_mediated_decay Homo_sapiens 0 1916
ENST00000457361 IKZF2-205 protein_coding Homo_sapiens 0 2326
ENST00000484040 IKZF2-012 retained_intron Homo_sapiens 0 2324

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