C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006PB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000030419-ENSG00000144451 CGP 9606 2:212999691-214410501
GeneTranscriptPositionBiotype
ENSG00000030419 (IKZF2)
IKAROS family zinc finger 2 (Helios) 		ENST00000342002 (IKZF2-002) 213005363-213150334 protein_coding
ENST00000374319 (IKZF2-003) 213007172-213151603 protein_coding
ENST00000374326 (IKZF2-009) 213007357-213148629 nonsense_mediated_decay
ENST00000374327 (IKZF2-201) 213007360-213148629 protein_coding
ENST00000412444 (IKZF2-006) 213007357-213148629 nonsense_mediated_decay
ENST00000413091 (IKZF2-202) 213007360-213148629 protein_coding
ENST00000421754 (IKZF2-203) 213007360-213148629 protein_coding
ENST00000431520 (IKZF2-011) 213007360-213148629 nonsense_mediated_decay
ENST00000433134 (IKZF2-014) 213049850-213150408 protein_coding
ENST00000434687 (IKZF2-001) 213005363-213151603 protein_coding
ENST00000439848 (IKZF2-008) 213007357-213148629 nonsense_mediated_decay
ENST00000442445 (IKZF2-004) 213147372-213150241 protein_coding
ENST00000451136 (IKZF2-204) 212999691-213151609 protein_coding
ENST00000452786 (IKZF2-013) 213056989-213152427 protein_coding
ENST00000453575 (IKZF2-005) 213007353-213148629 nonsense_mediated_decay
ENST00000457361 (IKZF2-205) 212999691-213151609 protein_coding
ENST00000484040 (IKZF2-012) 213006039-213015278 retained_intron
ENSG00000144451 (SPAG16)
sperm associated antigen 16 		ENST00000272898 (SPAG16-201) 213284379-213375219 protein_coding
ENST00000331683 (SPAG16-001) 213284389-214410501 protein_coding
ENST00000406979 (SPAG16-003) 213284389-214410501 nonsense_mediated_decay
ENST00000413312 (SPAG16-004) 213284416-213365418 protein_coding
ENST00000414961 (SPAG16-010) 213296064-213364145 processed_transcript
ENST00000420497 (SPAG16-011) 213284437-213302582 nonsense_mediated_decay
ENST00000432529 (SPAG16-002) 213284392-213317978 protein_coding
ENST00000440779 (SPAG16-009) 213284437-213375054 nonsense_mediated_decay
ENST00000447990 (SPAG16-006) 213284481-213422522 protein_coding
ENST00000451561 (SPAG16-007) 213489963-214410318 protein_coding
ENST00000452556 (SPAG16-005) 213284455-214241376 nonsense_mediated_decay
ENST00000480494 (SPAG16-008) 213923863-214410233 processed_transcript
ENSG00000196096 (AC079610.2)
 ENST00000360083 (AC079610.2-001) 213276552-213284205 lincRNA
ENSG00000197585 (AC107218.3)
 ENST00000412896 (AC107218.3-002) 214250040-214684246 antisense
ENST00000437883 (AC107218.3-001) 214311602-214684246 antisense
ENSG00000213917 (RPL5P8)
ribosomal protein L5 pseudogene 8 		ENST00000396820 (RPL5P8-001) 214280638-214281452 processed_pseudogene
ENSG00000236193 (RP11-105N14.3)
 ENST00000426870 (RP11-105N14.3-001) 213155806-213167712 lincRNA
ENSG00000270659 (RP11-105N14.1)
 ENST00000604818 (RP11-105N14.1-001) 213152970-213153659 lincRNA
ENSG00000272519 (RP11-105N14.2)
 ENST00000606960 (RP11-105N14.2-001) 213266995-213276152 lincRNA
ENSG00000273118 (AC079610.1)
 ENST00000415387 (AC079610.1-001) 212581357-213021545 sense_overlapping

Homo sapiens Ensembl (GRCh38)

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CIL_0006PB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025997-ENSMUSG00000053153 CGP 10090 1:69531214-70725132
GeneTranscriptPositionBiotype
ENSMUSG00000025997 (Ikzf2)
IKAROS family zinc finger 2 		ENSMUST00000027146 (Ikzf2-001) 69531214-69685821 protein_coding
ENSMUST00000187184 (Ikzf2-003) 69538582-69687245 protein_coding
ENSMUST00000187870 (Ikzf2-004) 69681558-69684536 retained_intron
ENSMUST00000188110 (Ikzf2-007) 69538768-69684157 protein_coding
ENSMUST00000188919 (Ikzf2-002) 69681559-69687140 retained_intron
ENSMUST00000190016 (Ikzf2-010) 69577890-69685300 protein_coding
ENSMUST00000190771 (Ikzf2-005) 69538037-69685886 protein_coding
ENSMUST00000190855 (Ikzf2-006) 69538768-69684157 protein_coding
ENSMUST00000191262 (Ikzf2-009) 69538768-69684157 protein_coding
ENSMUSG00000053153 (Spag16)
sperm associated antigen 16 		ENSMUST00000065425 (Spag16-001) 69826988-70725132 protein_coding
ENSMUST00000113940 (Spag16-002) 69826992-69926242 protein_coding
ENSMUST00000161131 (Spag16-004) 69831740-69873760 processed_transcript
ENSMUST00000161310 (Spag16-003) 69951621-70725132 processed_transcript
ENSMUST00000187159 (Spag16-005) 69826970-70267277 processed_transcript
ENSMUST00000190833 (Spag16-006) 69826971-70267178 processed_transcript
ENSMUST00000191569 (Spag16-007) 69951648-70282011 processed_transcript
ENSMUSG00000089345 (Gm22665)
predicted gene, 22665 		ENSMUST00000158720 (Gm22665-201) 69921473-69921747 misc_RNA
ENSMUSG00000099954 (RP23-471L1.5)
predicted gene 28112 		ENSMUST00000190898 (RP23-471L1.5-001) 69660187-69662061 sense_intronic
ENSMUSG00000100815 (RP23-471L1.3)
predicted gene 29112 		ENSMUST00000188962 (RP23-471L1.3-001) 69595036-69598522 sense_intronic
ENSMUSG00000101730 (RP24-468E2.1)
predicted gene 28580 		ENSMUST00000186767 (RP24-468E2.1-001) 70067968-70068055 unprocessed_pseudogene

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006PB_0001ENSG00000030419ENST00000342002ENST00000433134ENST00000434687ENST00000451136ENST00000484040ENSG00000144451ENST00000272898ENST00000331683ENST00000414961ENST00000432529ENST00000440779ENST00000447990ENSG00000196096ENST00000360083ENSG00000197585ENST00000412896ENST00000437883ENSG00000213917ENST00000396820ENSG00000236193ENST00000426870ENSG00000270659ENST00000604818ENSG00000272519ENST00000606960ENSG00000273118ENST00000415387CIL_0006PB_0002ENSMUSG00000025997ENSMUST00000027146ENSMUST00000187184ENSMUST00000188110ENSMUST00000190016ENSMUST00000190771ENSMUST00000191262ENSMUSG00000053153ENSMUST00000065425ENSMUST00000113940ENSMUST00000161131ENSMUST00000161310ENSMUST00000190833ENSMUSG00000089345ENSMUST00000158720ENSMUSG00000099954ENSMUST00000190898ENSMUSG00000100815ENSMUST00000188962ENSMUSG00000101730ENSMUST00000186767
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000030419 ENST00000342002 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.185±0.00 N/A N/A N/A
ENST00000374319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000374327 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000421754 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433134 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.659±0.00 2.116±0.00 N/A N/A
ENST00000434687 N/A N/A 0.576±0.00 0.349±0.00 N/A N/A N/A N/A N/A N/A 0.211±0.00 N/A N/A N/A
ENST00000439848 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000442445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451136 N/A N/A N/A 0.284±0.00 N/A N/A 0.272±0.00 N/A N/A N/A N/A N/A N/A 0.337±0.00
ENST00000452786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484040 N/A N/A N/A N/A 0.842±0.00 N/A N/A N/A 1.141±0.00 N/A 0.246±0.00 0.841±0.00 N/A N/A
ENSG00000144451 ENST00000272898 N/A N/A 2.868±0.00 N/A 0.542±0.00 2.139±0.00 N/A N/A 1.122±0.00 1.387±0.00 N/A 0.533±0.18 N/A N/A
ENST00000331683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.319±0.00 N/A 6.639±0.41
ENST00000406979 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000413312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414961 N/A N/A N/A N/A N/A N/A 1.309±0.00 N/A 3.551±0.00 2.806±0.00 0.564±0.30 1.309±0.00 N/A N/A
ENST00000420497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000432529 4.592±0.00 3.904±0.00 0.818±0.00 10.216±2.16 4.485±2.31 4.174±3.34 3.159±1.72 5.935±4.51 2.390±0.39 7.553±0.00 0.656±0.21 5.985±4.90 5.026±1.74 14.689±2.20
ENST00000440779 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.799±0.00 N/A N/A N/A N/A
ENST00000447990 N/A N/A N/A N/A N/A N/A N/A N/A 1.002±0.00 N/A N/A 0.518±0.00 N/A N/A
ENST00000451561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196096 ENST00000360083 0.237±0.00 0.741±0.00 0.104±0.00 0.532±0.00 0.335±0.20 0.228±0.02 0.166±0.09 0.519±0.01 0.242±0.03 0.204±0.07 0.023±0.00 0.419±0.23 0.115±0.13 1.464±0.89
ENSG00000197585 ENST00000412896 N/A N/A N/A N/A N/A N/A 0.087±0.00 N/A 0.112±0.00 N/A N/A N/A N/A N/A
ENST00000437883 N/A 0.077±0.00 N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.087±0.00 0.041±0.00
ENSG00000213917 ENST00000396820 1.150±0.00 2.350±0.00 N/A 0.598±0.00 1.609±0.00 2.936±0.00 0.589±0.00 1.895±0.00 1.302±0.00 0.892±0.00 0.496±0.00 0.425±0.00 0.049±0.00 3.829±0.00
ENSG00000236193 ENST00000426870 N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.02
ENSG00000270659 ENST00000604818 0.529±0.00 0.214±0.00 N/A 0.260±0.00 0.280±0.00 0.293±0.00 0.667±0.00 0.250±0.15 0.047±0.00 0.035±0.00 0.372±0.00 0.195±0.06 0.250±0.00 1.998±1.13
ENSG00000272519 ENST00000606960 N/A N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.631±0.69
ENSG00000273118 ENST00000415387 N/A N/A N/A 0.079±0.00 N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A 0.053±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025997 ENSMUST00000027146 0.491±0.22 0.200±0.00 5.840±0.74 0.457±0.30 1.020±0.36 0.580±0.13 0.212±0.08 0.290±0.11 0.090±0.06 0.789±0.21 0.176±0.02 0.618±0.11 0.089±0.05 0.103±0.00
ENSMUST00000187184 N/A N/A N/A N/A N/A 0.335±0.00 N/A N/A 0.026±0.00 N/A N/A 0.658±0.37 N/A 0.089±0.04
ENSMUST00000187870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188110 N/A N/A N/A N/A N/A N/A N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A
ENSMUST00000188919 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190016 N/A N/A N/A N/A N/A N/A 3.020±0.00 N/A N/A N/A N/A 4.060±0.55 N/A N/A
ENSMUST00000190771 0.235±0.00 0.174±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.439±0.14 N/A N/A
ENSMUST00000190855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191262 N/A 0.312±0.02 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A 0.411±0.00 0.164±0.00 N/A
ENSMUSG00000053153 ENSMUST00000065425 N/A N/A N/A 0.109±0.00 N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A N/A 10.754±0.64
ENSMUST00000113940 N/A N/A 0.007±0.00 0.189±0.12 N/A 0.027±0.00 0.223±0.01 0.018±0.01 0.008±0.00 3.468±0.21 N/A 2.495±0.74 0.024±0.01 N/A
ENSMUST00000161131 N/A N/A 0.009±0.00 1.468±0.00 N/A N/A N/A N/A 0.008±0.00 N/A N/A 2.808±0.00 0.054±0.00 N/A
ENSMUST00000161310 N/A N/A N/A N/A N/A N/A 0.063±0.03 N/A N/A N/A N/A N/A N/A 52.589±22.80
ENSMUST00000187159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.939±0.00 0.044±0.00 N/A
ENSMUST00000191569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000089345 ENSMUST00000158720 N/A N/A N/A 0.395±0.00 N/A N/A N/A N/A N/A 0.400±0.00 N/A 0.394±0.00 N/A 0.837±0.41
ENSMUSG00000099954 ENSMUST00000190898 0.047±0.04 0.147±0.04 0.506±0.12 0.124±0.04 0.103±0.07 0.108±0.03 0.058±0.04 0.073±0.02 0.036±0.02 0.064±0.03 N/A 0.112±0.12 0.034±0.00 0.056±0.00
ENSMUSG00000100815 ENSMUST00000188962 N/A N/A 0.091±0.02 0.035±0.01 0.043±0.00 0.052±0.00 0.017±0.00 0.016±0.00 0.005±0.00 0.028±0.01 0.008±0.00 0.092±0.00 0.014±0.00 0.010±0.01
ENSMUSG00000101730 ENSMUST00000186767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 141.296±0.00

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