C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: origin recognition complex, subunit 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026037 Orc2 10090 - 1:58462771-58505109 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027198 Orc2-001 58462771-58505109 protein_coding
  ENSMUST00000114325 Orc2-002 58464204-58501416 protein_coding
  ENSMUST00000151723 Orc2-003 58480311-58481449 retained_intron
  ENSMUST00000190695 Orc2-005 58483698-58504925 protein_coding
  ENSMUST00000191206 Orc2-004 58500346-58504955 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027198ENSMUST00000114325
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027198 4.166±0.00 8.911±1.19 8.172±1.32 3.977±0.15 2.438±0.06 2.740±0.67 13.741±12.35 2.733±0.36 3.349±0.80 7.239±1.99 12.107±5.85 5.689±1.67
ENSMUST00000114325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.086±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AV CIL_0002AV_0002 CGP 1:58430994-58481816
CIL_0002AW CIL_0002AW_0002 CGP 1:58445151-58505109
CIL_0002AT CIL_0002AT_0002 CGP 1:58462771-58586323

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0000792 IDA heterochromatin
GO:0000939 IDA condensed chromosome inner kinetochore
GO:0003688 IDA DNA replication origin binding
GO:0005515 IEA protein binding
GO:0005664 IDA nuclear origin of replication recognition complex
GO:0005886 IEA plasma membrane
GO:0006260 IEA DNA replication
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000090203 ORC2 origin recognition complex, subunit 2 protein_coding Danio_rerio
ENSG00000115942 ORC2 origin recognition complex, subunit 2 protein_coding Homo_sapiens

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