C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115942-ENSG00000155744 CGP 9606 2:200908973-201071671
GeneTranscriptPositionBiotype
ENSG00000115942 (ORC2)
origin recognition complex, subunit 2 		ENST00000234296 (ORC2-001) 200908973-200963680 protein_coding
ENST00000410039 (ORC2-006) 200949554-200963377 protein_coding
ENST00000457595 (ORC2-007) 200957422-200963258 protein_coding
ENST00000464147 (ORC2-002) 200910454-200926904 retained_intron
ENST00000467605 (ORC2-005) 200942684-200963680 processed_transcript
ENST00000474877 (ORC2-004) 200933876-200943159 processed_transcript
ENST00000487853 (ORC2-003) 200920221-200921738 retained_intron
ENSG00000119013 (NDUFB3)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa 		ENST00000237889 (NDUFB3-001) 201071739-201085750 protein_coding
ENST00000433898 (NDUFB3-003) 201072008-201085744 protein_coding
ENST00000450023 (NDUFB3-002) 201071433-201085513 protein_coding
ENST00000454214 (NDUFB3-004) 201072030-201085750 protein_coding
ENSG00000155744 (FAM126B)
family with sequence similarity 126, member B 		ENST00000286181 (FAM126B-002) 200978493-201071665 nonsense_mediated_decay
ENST00000418596 (FAM126B-001) 200973718-201071669 protein_coding
ENST00000446678 (FAM126B-008) 201017127-201071653 protein_coding
ENST00000452799 (FAM126B-006) 200997445-201071645 protein_coding
ENST00000453765 (FAM126B-007) 201017062-201071579 protein_coding
ENST00000474118 (FAM126B-009) 201022481-201071628 retained_intron
ENST00000485144 (FAM126B-005) 201021448-201022884 processed_transcript
ENST00000485636 (FAM126B-010) 201022546-201071671 retained_intron
ENST00000490725 (FAM126B-003) 200996050-201009452 retained_intron
ENST00000494881 (FAM126B-011) 201023616-201045557 retained_intron
ENST00000498780 (FAM126B-004) 200996050-201071669 retained_intron
ENSG00000225695 (HNRNPA1P35)
heterogeneous nuclear ribonucleoprotein A1 pseudogene 35 		ENST00000429216 (HNRNPA1P35-001) 201063089-201064051 processed_pseudogene
ENSG00000226658 (AC005037.4)
 ENST00000432419 (AC005037.4-001) 201066691-201067191 processed_pseudogene
CIL_0002AT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026037-ENSMUSG00000038174 CGP 10090 1:58462771-58586323
GeneTranscriptPositionBiotype
ENSMUSG00000026036 (Nif3l1)
Ngg1 interacting factor 3-like 1 (S. pombe) 		ENSMUST00000087521 (Nif3l1-001) 58445151-58463456 protein_coding
ENSMUST00000114337 (Nif3l1-002) 58445267-58481816 protein_coding
ENSMUST00000129759 (Nif3l1-004) 58445628-58450507 nonsense_mediated_decay
ENSMUST00000140723 (Nif3l1-005) 58449167-58457800 retained_intron
ENSMUST00000151272 (Nif3l1-003) 58445729-58448050 protein_coding
ENSMUST00000171597 (Nif3l1-201) 58447631-58462266 protein_coding
ENSMUST00000185578 (Nif3l1-007) 58453404-58456188 retained_intron
ENSMUST00000188295 (Nif3l1-008) 58457685-58461384 retained_intron
ENSMUSG00000026037 (Orc2)
origin recognition complex, subunit 2 		ENSMUST00000027198 (Orc2-001) 58462771-58505109 protein_coding
ENSMUST00000114325 (Orc2-002) 58464204-58501416 protein_coding
ENSMUST00000151723 (Orc2-003) 58480311-58481449 retained_intron
ENSMUST00000190695 (Orc2-005) 58483698-58504925 protein_coding
ENSMUST00000191206 (Orc2-004) 58500346-58504955 protein_coding
ENSMUSG00000038174 (Fam126b)
family with sequence similarity 126, member B 		ENSMUST00000038372 (Fam126b-003) 58529083-58586191 protein_coding
ENSMUST00000097724 (Fam126b-002) 58527021-58586266 protein_coding
ENSMUST00000159185 (Fam126b-004) 58565604-58586297 retained_intron
ENSMUST00000159980 (Fam126b-005) 58557360-58586277 retained_intron
ENSMUST00000160546 (Fam126b-006) 58557333-58586264 processed_transcript
ENSMUST00000161000 (Fam126b-007) 58552187-58586275 protein_coding
ENSMUST00000161600 (Fam126b-001) 58522806-58586323 protein_coding
ENSMUST00000187717 (Fam126b-009) 58527743-58565954 nonsense_mediated_decay
ENSMUST00000191472 (Fam126b-008) 58562431-58565220 retained_intron
ENSMUSG00000085054 (Gm15834)
predicted gene 15834 		ENSMUST00000129740 (Gm15834-002) 58505152-58517530 lincRNA
ENSMUST00000139825 (Gm15834-001) 58505155-58523230 lincRNA
ENSMUST00000160947 (Gm15834-003) 58505148-58512616 lincRNA
ENSMUSG00000094245 (Gm23966)
predicted gene, 23966 		ENSMUST00000179823 (Gm23966-201) 58466515-58466621 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AT_0001ENSG00000115942ENST00000234296ENST00000410039ENST00000457595ENST00000464147ENST00000467605ENST00000474877ENST00000487853ENSG00000119013ENST00000237889ENST00000433898ENST00000450023ENST00000454214ENSG00000155744ENST00000286181ENST00000418596ENST00000446678ENST00000452799ENST00000453765ENST00000474118ENST00000485144ENST00000485636ENST00000490725ENST00000494881ENST00000498780ENSG00000225695ENST00000429216ENSG00000226658ENST00000432419CIL_0002AT_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AT_0001ENSG00000115942ENST00000234296ENST00000464147ENSG00000119013ENST00000237889ENST00000433898ENST00000454214ENSG00000155744ENST00000286181ENST00000418596ENSG00000225695ENST00000429216ENSG00000226658ENST00000432419CIL_0002AT_0002ENSMUSG00000026036ENSMUST00000087521ENSMUST00000114337ENSMUST00000171597ENSMUSG00000026037ENSMUST00000027198ENSMUST00000114325ENSMUSG00000038174ENSMUST00000038372ENSMUST00000097724ENSMUST00000161600ENSMUST00000187717ENSMUSG00000085054ENSMUST00000129740ENSMUST00000139825ENSMUSG00000094245ENSMUST00000179823
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115942 ENST00000234296 3.784±0.00 3.373±0.00 1.730±0.00 3.342±0.12 2.720±0.56 2.233±0.71 2.303±0.88 2.850±0.69 1.731±0.95 2.655±0.88 1.379±0.46 7.603±4.15 2.600±1.06 10.147±3.48
ENST00000410039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.878±5.20
ENST00000467605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000119013 ENST00000237889 N/A N/A N/A 22.235±0.00 18.340±0.00 15.814±0.00 21.103±8.69 N/A 6.058±0.00 N/A 8.187±0.78 72.675±0.00 11.254±5.39 31.145±11.61
ENST00000433898 N/A 34.420±0.00 N/A 53.225±0.00 30.981±0.00 29.195±0.00 61.952±49.05 58.385±0.00 18.632±0.00 20.796±0.00 9.502±0.00 45.293±0.00 22.992±3.78 39.557±0.00
ENST00000450023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 85.935±0.00 37.219±0.00 N/A
ENSG00000155744 ENST00000286181 N/A N/A 1.206±0.00 N/A 1.643±0.00 2.666±0.00 1.406±0.00 N/A 2.306±0.00 2.274±0.00 0.733±0.00 2.617±0.00 N/A N/A
ENST00000418596 2.145±0.00 1.349±0.00 N/A 3.381±0.00 2.123±0.00 N/A 1.140±0.00 N/A 0.423±0.00 2.169±0.00 0.631±0.00 2.563±1.37 1.161±0.76 2.496±1.39
ENST00000446678 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452799 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494881 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225695 ENST00000429216 0.236±0.00 0.512±0.00 N/A 0.191±0.06 0.180±0.02 0.320±0.20 0.108±0.01 0.111±0.04 0.108±0.04 0.104±0.04 0.090±0.00 0.201±0.16 0.032±0.01 0.054±0.00
ENSG00000226658 ENST00000432419 N/A 0.163±0.00 N/A 0.027±0.00 0.107±0.00 0.078±0.00 0.048±0.00 0.081±0.00 N/A N/A N/A 0.117±0.05 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026036 ENSMUST00000087521 3.071±0.32 3.509±0.34 2.858±0.00 5.425±0.17 3.117±0.59 3.654±0.00 1.229±0.00 2.367±0.22 2.672±1.40 3.570±0.25 N/A 5.297±1.46 3.207±0.00 3.444±0.28
ENSMUST00000114337 6.940±0.53 5.879±2.00 N/A N/A 5.018±0.80 5.007±1.23 3.172±0.00 3.757±0.74 3.653±0.32 4.292±0.81 N/A 8.097±1.42 N/A N/A
ENSMUST00000129759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171597 6.567±2.01 4.700±0.76 7.351±0.00 10.929±4.57 4.602±1.89 4.499±0.42 2.881±0.57 4.769±1.01 5.404±3.68 3.882±0.29 3.448±0.37 8.972±2.10 8.941±2.77 N/A
ENSMUST00000185578 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000026037 ENSMUST00000027198 4.166±0.00 N/A 8.911±1.19 8.172±1.32 3.977±0.15 N/A 2.438±0.06 2.740±0.67 13.741±12.35 2.733±0.36 3.349±0.80 7.239±1.99 12.107±5.85 5.689±1.67
ENSMUST00000114325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.086±0.00 N/A
ENSMUST00000151723 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190695 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038174 ENSMUST00000038372 2.004±0.58 0.536±0.17 N/A N/A 2.336±1.17 0.899±0.00 0.388±0.10 1.217±0.40 0.897±0.19 0.707±0.00 N/A 0.984±0.23 N/A 1.557±0.79
ENSMUST00000097724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.455±0.00 N/A N/A
ENSMUST00000159185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000159980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000160546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161000 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161600 1.085±0.00 0.812±0.39 2.528±1.41 2.401±0.26 1.033±0.09 0.534±0.17 0.216±0.02 1.761±0.50 0.866±0.33 1.226±0.34 0.418±0.29 0.971±0.18 1.242±0.65 0.470±0.21
ENSMUST00000187717 0.767±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.844±0.00 N/A 0.800±0.36 N/A 0.321±0.07
ENSMUST00000191472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085054 ENSMUST00000129740 N/A 0.320±0.05 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.555±0.00 N/A N/A
ENSMUST00000139825 N/A 0.338±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A
ENSMUST00000160947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000094245 ENSMUST00000179823 N/A N/A N/A 33.175±0.00 N/A N/A N/A N/A 31.593±0.00 N/A N/A 2785.791±2730.11 20.985±0.00 N/A

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