C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: origin recognition complex, subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027198 Orc2-001 ENSMUSG00000026037 10090 - 1:58462771-58505109 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027198
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027198 4.166±0.00 8.911±1.19 8.172±1.32 3.977±0.15 2.438±0.06 2.740±0.67 13.741±12.35 2.733±0.36 3.349±0.80 7.239±1.99 12.107±5.85 5.689±1.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AV CIL_0002AV_0002 CGP 1:58430994-58481816
CIL_0002AW CIL_0002AW_0002 CGP 1:58445151-58505109
CIL_0002AT CIL_0002AT_0002 CGP 1:58462771-58586323

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000785 IDA chromatin
GO:0000792 IDA heterochromatin
GO:0000939 IDA condensed chromosome inner kinetochore
GO:0003688 IDA DNA replication origin binding
GO:0005515 IEA protein binding
GO:0005664 IDA nuclear origin of replication recognition complex
GO:0005886 IEA plasma membrane
GO:0006260 IEA DNA replication
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000234296 ORC2-001 protein_coding Homo_sapiens 0 1958
ENST00000464147 ORC2-002 retained_intron Homo_sapiens 0 793
ENST00000487853 ORC2-003 retained_intron Homo_sapiens 0 451

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