C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cyclic nucleotide gated channel alpha 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026114 Cnga3 10090 + 1:37219261-37263383 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027288 Cnga3-201 37219261-37263383 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027288
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027288 0.009±0.00 0.237±0.06 0.025±0.01 0.086±0.05 0.163±0.08 0.413±0.25 0.008±0.00 0.003±0.00 0.019±0.01 0.271±0.08 0.007±0.00 0.007±0.01 0.411±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002U5 CIL_0002U5_0002 CGP 1:37219261-37410736

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001750 IDA photoreceptor outer segment
GO:0005221 IPI intracellular cyclic nucleotide activated cation channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0005886 IDA plasma membrane
GO:0005887 IBA integral component of plasma membrane
GO:0006812 IEA cation transport
GO:0007601 IEA visual perception
GO:0007603 IBA phototransduction, visible light
GO:0008022 IEA protein C-terminus binding
GO:0030425 IEA dendrite
GO:0030553 IBA cGMP binding
GO:0031960 IEA response to corticosteroid
GO:0032026 IEA response to magnesium ion
GO:0034220 IEA ion transmembrane transport
GO:0042391 IBA regulation of membrane potential
GO:0042622 IEA photoreceptor outer segment membrane
GO:0043025 IEA neuronal cell body
GO:0043204 IEA perikaryon
GO:0046549 IMP retinal cone cell development
GO:0051591 IEA response to cAMP
GO:0071805 IBA potassium ion transmembrane transport
GO:1902495 IEA transmembrane transporter complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012297 cnga3b cyclic nucleotide gated channel alpha 3b protein_coding Danio_rerio
ENSDARG00000070726 cnga3a cyclic nucleotide gated channel alpha 3a protein_coding Danio_rerio
ENSG00000144191 CNGA3 cyclic nucleotide gated channel alpha 3 protein_coding Homo_sapiens

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