C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002U5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000144191-ENSG00000040933 CGP 9606 2:98346155-98594390
GeneTranscriptPositionBiotype
ENSG00000040933 (INPP4A)
inositol polyphosphate-4-phosphatase, type I, 107kDa 		ENST00000074304 (INPP4A-201) 98444858-98591033 protein_coding
ENST00000409016 (INPP4A-001) 98444854-98594390 protein_coding
ENST00000409463 (INPP4A-003) 98444858-98587859 protein_coding
ENST00000409540 (INPP4A-002) 98444950-98581821 protein_coding
ENST00000409851 (INPP4A-004) 98444858-98587661 protein_coding
ENST00000463367 (INPP4A-005) 98519147-98521766 retained_intron
ENST00000467042 (INPP4A-007) 98566028-98569830 processed_transcript
ENST00000468638 (INPP4A-006) 98554425-98556122 retained_intron
ENST00000498026 (INPP4A-008) 98571897-98587573 processed_transcript
ENST00000523221 (INPP4A-009) 98520049-98587608 protein_coding
ENSG00000144191 (CNGA3)
cyclic nucleotide gated channel alpha 3 		ENST00000272602 (CNGA3-001) 98369937-98398601 protein_coding
ENST00000393503 (CNGA3-004) 98379901-98389772 retained_intron
ENST00000393504 (CNGA3-201) 98346155-98398594 protein_coding
ENST00000409937 (CNGA3-003) 98377288-98397632 protein_coding
ENST00000436404 (CNGA3-002) 98346188-98397344 protein_coding
ENSG00000222000 (AC092675.3)
 ENST00000409490 (AC092675.3-001) 98331389-98333971 antisense
ENST00000454230 (AC092675.3-003) 98333214-98356005 antisense
ENST00000467398 (AC092675.3-002) 98331708-98334380 antisense
CIL_0002U5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026114-ENSMUSG00000026113 CGP 10090 1:37219261-37410736
GeneTranscriptPositionBiotype
ENSMUSG00000026113 (Inpp4a)
inositol polyphosphate-4-phosphatase, type I 		ENSMUST00000027287 (Inpp4a-201) 37299893-37410736 protein_coding
ENSMUST00000058307 (Inpp4a-007) 37369217-37404434 protein_coding
ENSMUST00000114933 (Inpp4a-008) 37369217-37404442 protein_coding
ENSMUST00000123124 (Inpp4a-010) 37377672-37380075 retained_intron
ENSMUST00000132401 (Inpp4a-004) 37299915-37408289 protein_coding
ENSMUST00000132615 (Inpp4a-001) 37357919-37410736 protein_coding
ENSMUST00000136846 (Inpp4a-005) 37299893-37408289 protein_coding
ENSMUST00000137266 (Inpp4a-006) 37357919-37408259 protein_coding
ENSMUST00000140264 (Inpp4a-002) 37300308-37399557 protein_coding
ENSMUST00000146676 (Inpp4a-009) 37299865-37348512 processed_transcript
ENSMUST00000168546 (Inpp4a-202) 37369221-37404439 protein_coding
ENSMUSG00000026114 (Cnga3)
cyclic nucleotide gated channel alpha 3 		ENSMUST00000027288 (Cnga3-201) 37219261-37263383 protein_coding
ENSMUSG00000086064 (4930439A04Rik)
RIKEN cDNA 4930439A04 gene 		ENSMUST00000137241 (4930439A04Rik-001) 37329667-37334156 antisense
ENSMUST00000141402 (4930439A04Rik-002) 37333539-37334172 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U5_0001ENSG00000040933ENST00000074304ENST00000409016ENST00000409463ENST00000409540ENST00000409851ENST00000463367ENST00000467042ENST00000468638ENST00000498026ENST00000523221ENSG00000144191ENST00000272602ENST00000393503ENST00000393504ENST00000409937ENST00000436404ENSG00000222000ENST00000409490ENST00000454230ENST00000467398CIL_0002U5_0002ENSMUSG00000026113ENSMUST00000027287ENSMUST00000058307ENSMUST00000114933ENSMUST00000123124ENSMUST00000132401ENSMUST00000132615ENSMUST00000136846ENSMUST00000137266ENSMUST00000140264ENSMUST00000146676ENSMUST00000168546ENSMUSG00000026114ENSMUST00000027288ENSMUSG00000086064ENSMUST00000137241ENSMUST00000141402
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002U5_0001ENSG00000040933ENST00000074304ENST00000409016ENST00000409463ENST00000409540ENST00000409851ENST00000498026ENST00000523221ENSG00000144191ENST00000272602ENST00000409937ENST00000436404ENSG00000222000ENST00000409490ENST00000467398CIL_0002U5_0002ENSMUSG00000026113ENSMUST00000027287ENSMUST00000058307ENSMUST00000114933ENSMUST00000123124ENSMUST00000132401ENSMUST00000132615ENSMUST00000136846ENSMUST00000137266ENSMUST00000140264ENSMUST00000168546ENSMUSG00000026114ENSMUST00000027288ENSMUSG00000086064ENSMUST00000137241ENSMUST00000141402
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000040933 ENST00000074304 3.192±0.00 4.938±0.00 0.393±0.00 8.955±1.45 2.250±0.40 2.690±1.30 1.679±1.17 2.576±0.00 1.498±0.81 2.499±0.54 0.871±0.22 3.354±2.31 2.041±0.12 3.296±0.98
ENST00000409016 N/A N/A N/A N/A N/A N/A N/A N/A 0.817±0.00 N/A N/A 0.459±0.04 N/A 0.355±0.00
ENST00000409463 N/A N/A N/A N/A N/A N/A N/A 1.461±0.00 N/A N/A N/A N/A N/A N/A
ENST00000409540 N/A N/A N/A N/A N/A N/A 1.661±0.00 N/A N/A N/A 0.891±0.00 N/A N/A N/A
ENST00000409851 N/A N/A N/A 6.477±0.00 N/A N/A 0.531±0.00 1.238±0.00 3.442±0.00 2.581±0.74 N/A 4.113±0.00 1.050±0.07 1.148±0.00
ENST00000463367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467042 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498026 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.727±0.00
ENST00000523221 N/A N/A 0.646±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000144191 ENST00000272602 N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A 0.008±0.00 0.060±0.04 N/A 0.027±0.01 0.016±0.00 0.366±0.00
ENST00000393503 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393504 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409937 N/A N/A N/A 0.155±0.00 N/A N/A 0.014±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000436404 0.016±0.00 N/A N/A 0.335±0.00 N/A 0.094±0.00 N/A 0.110±0.00 N/A 0.058±0.00 N/A 0.017±0.00 0.014±0.00 N/A
ENSG00000222000 ENST00000409490 N/A N/A N/A 0.242±0.00 N/A 0.186±0.00 N/A N/A N/A N/A N/A N/A N/A 0.141±0.00
ENST00000454230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467398 N/A N/A N/A 0.197±0.00 N/A N/A N/A N/A N/A N/A N/A 0.109±0.01 N/A 0.469±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026113 ENSMUST00000027287 5.945±0.25 1.227±0.33 6.879±2.10 7.458±2.49 1.807±0.27 2.396±0.70 1.451±0.46 1.004±0.00 0.835±0.17 3.601±1.80 1.095±0.00 2.011±0.60 1.548±0.39 N/A
ENSMUST00000058307 2.352±0.00 N/A N/A N/A N/A 1.900±0.17 N/A N/A 0.974±0.45 N/A N/A 2.838±0.59 N/A 3.899±0.00
ENSMUST00000114933 N/A N/A N/A N/A 1.002±0.00 N/A N/A N/A N/A N/A 0.866±0.00 N/A N/A N/A
ENSMUST00000123124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.464±0.00
ENSMUST00000132401 2.044±0.21 2.068±0.06 N/A 3.552±0.00 2.697±0.92 1.768±0.05 1.520±0.00 0.912±0.32 1.032±0.77 2.995±0.00 N/A 2.216±0.87 2.246±1.76 4.675±0.62
ENSMUST00000132615 1.350±0.00 1.346±0.40 5.550±0.00 5.394±3.52 0.972±0.00 0.998±0.00 1.339±0.48 0.564±0.15 0.805±0.31 3.820±1.71 0.922±0.43 1.571±0.13 1.078±0.38 0.360±0.00
ENSMUST00000136846 N/A 1.069±0.00 N/A N/A N/A 1.810±0.44 1.626±0.00 N/A 0.742±0.04 N/A N/A 3.485±1.02 N/A 7.970±2.81
ENSMUST00000137266 N/A N/A N/A N/A N/A N/A N/A 0.748±0.16 N/A N/A N/A 2.079±0.00 N/A 1.008±0.00
ENSMUST00000140264 1.280±0.00 1.268±0.05 N/A N/A 1.726±0.75 1.386±0.00 N/A N/A 0.990±0.00 1.973±0.00 N/A 1.691±0.19 N/A N/A
ENSMUST00000146676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.789±0.00
ENSMUSG00000026114 ENSMUST00000027288 0.009±0.00 0.237±0.06 N/A 0.025±0.01 0.086±0.05 0.163±0.08 0.413±0.25 0.008±0.00 0.003±0.00 0.019±0.01 0.271±0.08 0.007±0.00 0.007±0.01 0.411±0.16
ENSMUSG00000086064 ENSMUST00000137241 0.054±0.01 N/A 0.044±0.00 0.033±0.00 0.095±0.03 0.191±0.11 0.082±0.00 N/A 0.021±0.01 0.149±0.09 0.080±0.00 0.223±0.04 0.033±0.00 6.273±2.01
ENSMUST00000141402 N/A N/A N/A N/A 0.315±0.00 0.263±0.00 N/A 0.103±0.00 0.250±0.23 N/A N/A N/A N/A 0.649±0.00

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