C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 142
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026135 Zfp142 10090 - 1:74565127-74588246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027315 Zfp142-008 74566426-74588025 protein_coding
  ENSMUST00000066986 Zfp142-004 74566502-74588145 protein_coding
  ENSMUST00000113737 Zfp142-001 74565127-74588028 protein_coding
  ENSMUST00000127921 Zfp142-003 74566869-74585663 nonsense_mediated_decay
  ENSMUST00000130112 Zfp142-002 74582232-74587952 retained_intron
  ENSMUST00000136865 Zfp142-006 74582225-74588195 retained_intron
  ENSMUST00000147011 Zfp142-007 74585585-74588133 processed_transcript
  ENSMUST00000156613 Zfp142-005 74566683-74588246 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027315ENSMUST00000066986ENSMUST00000113737ENSMUST00000127921ENSMUST00000130112ENSMUST00000136865ENSMUST00000156613
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027315 2.800±1.14 4.660±1.66 1.822±0.48 6.726±2.14 2.721±0.80 2.543±0.57 1.946±0.23 2.211±0.36 1.105±0.38 2.375±0.37 N/A 3.588±1.37 1.934±0.90 N/A
ENSMUST00000066986 N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.07 N/A N/A 1.392±0.00 0.734±0.28 N/A
ENSMUST00000113737 1.214±0.37 N/A 0.877±0.10 1.154±0.02 1.396±0.33 N/A 0.591±0.10 0.716±0.11 0.385±0.10 1.300±0.38 3.076±0.20 1.353±0.44 0.590±0.11 2.690±0.26
ENSMUST00000127921 2.503±0.88 N/A 2.615±0.34 7.034±2.88 2.812±0.50 2.851±0.37 1.166±0.31 1.643±0.30 0.982±0.47 1.723±0.00 N/A 3.351±1.53 1.953±0.62 N/A
ENSMUST00000130112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 0.581±0.00 N/A
ENSMUST00000136865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.17 0.929±0.00 N/A
ENSMUST00000156613 N/A N/A N/A N/A N/A 0.927±0.08 N/A N/A 0.388±0.00 N/A N/A 1.907±0.44 0.819±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066C CIL_00066C_0002 CGP 1:74506058-74567794
CIL_0000AR CIL_0000AR_0003 CGP 1:74542888-74588246
CIL_0000AQ CIL_0000AQ_0003 CGP 1:74565127-74592443

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061373 znf142 zinc finger protein 142 protein_coding Danio_rerio
ENSG00000115568 ZNF142 zinc finger protein 142 protein_coding Homo_sapiens

Loading