C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000AR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040684-ENSDARG00000061373 CGP 7955 9:39424525-39451741
GeneTranscriptPositionBiotype
ENSDARG00000040684 (plcd4b)
phospholipase C, delta 4b 		ENSDART00000059593 (plcd4b-201) 39425995-39442320 protein_coding
ENSDART00000141895 (plcd4b-001) 39424525-39441173 protein_coding
ENSDARG00000061373 (znf142)
zinc finger protein 142 		ENSDART00000087409 (znf142-201) 39442516-39449404 protein_coding
ENSDART00000148268 (znf142-001) 39442151-39451741 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000AR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115556-ENSG00000115568 CGP 9606 2:218607765-218659655
GeneTranscriptPositionBiotype
ENSG00000074582 (BCS1L)
BC1 (ubiquinol-cytochrome c reductase) synthesis-like 		ENST00000359273 (BCS1L-003) 218659656-218663443 protein_coding
ENST00000392109 (BCS1L-001) 218659709-218663443 protein_coding
ENST00000392110 (BCS1L-002) 218659714-218663442 protein_coding
ENST00000392111 (BCS1L-007) 218659735-218663443 protein_coding
ENST00000412366 (BCS1L-004) 218659737-218663443 protein_coding
ENST00000423377 (BCS1L-013) 218659717-218661416 protein_coding
ENST00000426649 (BCS1L-018) 218661950-218663442 protein_coding
ENST00000428880 (BCS1L-008) 218658764-218661217 protein_coding
ENST00000430322 (BCS1L-009) 218658805-218661916 protein_coding
ENST00000431802 (BCS1L-006) 218659772-218663442 protein_coding
ENST00000436603 (BCS1L-019) 218662197-218663442 protein_coding
ENST00000439945 (BCS1L-005) 218659760-218663404 protein_coding
ENST00000443791 (BCS1L-011) 218659656-218662602 protein_coding
ENST00000456050 (BCS1L-010) 218659376-218661916 protein_coding
ENST00000460579 (BCS1L-017) 218661851-218663414 retained_intron
ENST00000465706 (BCS1L-020) 218661918-218663441 processed_transcript
ENST00000471576 (BCS1L-015) 218661064-218662540 retained_intron
ENST00000477422 (BCS1L-016) 218661666-218663413 retained_intron
ENST00000490188 (BCS1L-012) 218659659-218660598 retained_intron
ENST00000493376 (BCS1L-014) 218660867-218661514 retained_intron
ENSG00000115568 (ZNF142)
zinc finger protein 142 		ENST00000411696 (ZNF142-201) 218637921-218659540 protein_coding
ENST00000432460 (ZNF142-006) 218656387-218659539 protein_coding
ENST00000433921 (ZNF142-004) 218638145-218659502 nonsense_mediated_decay
ENST00000440934 (ZNF142-008) 218650501-218656403 protein_coding
ENST00000449707 (ZNF142-001) 218637916-218659524 protein_coding
ENST00000450560 (ZNF142-007) 218656350-218659476 protein_coding
ENST00000450765 (ZNF142-002) 218638145-218659655 nonsense_mediated_decay
ENSG00000273466 (RP11-548H3.1)
 ENST00000607946 (RP11-548H3.1-001) 218633256-218634014 antisense

Homo sapiens Ensembl (GRCh38)

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CIL_0000AR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026173-ENSMUSG00000026135 CGP 10090 1:74542888-74588246
GeneTranscriptPositionBiotype
ENSMUSG00000026135 (Zfp142)
zinc finger protein 142 		ENSMUST00000027315 (Zfp142-008) 74566426-74588025 protein_coding
ENSMUST00000066986 (Zfp142-004) 74566502-74588145 protein_coding
ENSMUST00000113737 (Zfp142-001) 74565127-74588028 protein_coding
ENSMUST00000127921 (Zfp142-003) 74566869-74585663 nonsense_mediated_decay
ENSMUST00000130112 (Zfp142-002) 74582232-74587952 retained_intron
ENSMUST00000136865 (Zfp142-006) 74582225-74588195 retained_intron
ENSMUST00000147011 (Zfp142-007) 74585585-74588133 processed_transcript
ENSMUST00000156613 (Zfp142-005) 74566683-74588246 nonsense_mediated_decay
ENSMUSG00000026173 (Plcd4)
phospholipase C, delta 4 		ENSMUST00000027362 (Plcd4-001) 74544364-74565977 protein_coding
ENSMUST00000067916 (Plcd4-201) 74542888-74567794 protein_coding
ENSMUST00000113745 (Plcd4-005) 74542903-74560606 retained_intron
ENSMUST00000113747 (Plcd4-004) 74542903-74565977 protein_coding
ENSMUST00000113749 (Plcd4-202) 74542888-74567794 protein_coding
ENSMUST00000113750 (Plcd4-006) 74542903-74565977 protein_coding
ENSMUST00000135111 (Plcd4-007) 74564437-74565626 retained_intron
ENSMUST00000141412 (Plcd4-003) 74542888-74567794 nonsense_mediated_decay
ENSMUST00000152707 (Plcd4-002) 74544364-74565977 nonsense_mediated_decay
ENSMUST00000185411 (Plcd4-008) 74544360-74546271 retained_intron
ENSMUST00000189956 (Plcd4-009) 74560427-74565301 processed_transcript
ENSMUSG00000033364 (Usp37)
ubiquitin specific peptidase 37 		ENSMUST00000044260 (Usp37-002) 74435511-74505803 protein_coding
ENSMUST00000186282 (Usp37-007) 74495718-74505806 protein_coding
ENSMUST00000187590 (Usp37-005) 74499956-74506283 processed_transcript
ENSMUST00000188012 (Usp37-004) 74439127-74467574 processed_transcript
ENSMUST00000189257 (Usp37-001) 74437730-74544284 protein_coding
ENSMUST00000190592 (Usp37-006) 74499872-74505791 retained_intron
ENSMUST00000191058 (Usp37-003) 74449502-74505785 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AR_0001ENSDARG00000040684ENSDART00000059593ENSDART00000141895ENSDARG00000061373ENSDART00000087409ENSDART00000148268CIL_0000AR_0002ENSG00000074582ENST00000359273ENST00000392109ENST00000392110ENST00000392111ENST00000412366ENST00000423377ENST00000426649ENST00000428880ENST00000430322ENST00000431802ENST00000436603ENST00000439945ENST00000443791ENST00000456050ENST00000460579ENST00000465706ENST00000471576ENST00000477422ENST00000490188ENST00000493376ENSG00000115568ENST00000411696ENST00000432460ENST00000433921ENST00000440934ENST00000449707ENST00000450560ENST00000450765ENSG00000273466ENST00000607946CIL_0000AR_0003ENSMUSG00000026135ENSMUST00000027315ENSMUST00000066986ENSMUST00000113737ENSMUST00000127921ENSMUST00000130112ENSMUST00000136865ENSMUST00000147011ENSMUST00000156613ENSMUSG00000026173ENSMUST00000027362ENSMUST00000067916ENSMUST00000113745ENSMUST00000113747ENSMUST00000113749ENSMUST00000113750ENSMUST00000135111ENSMUST00000141412ENSMUST00000152707ENSMUST00000185411ENSMUST00000189956ENSMUSG00000033364ENSMUST00000044260ENSMUST00000186282ENSMUST00000187590ENSMUST00000188012ENSMUST00000189257ENSMUST00000190592ENSMUST00000191058
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000AR_0001ENSDARG00000040684ENSDART00000059593ENSDART00000141895ENSDARG00000061373ENSDART00000087409ENSDART00000148268CIL_0000AR_0002ENSG00000074582ENST00000359273ENST00000392110ENST00000392111ENST00000412366ENST00000426649ENST00000431802ENST00000439945ENST00000443791ENST00000471576ENST00000490188ENST00000493376ENSG00000115568ENST00000411696ENST00000433921ENST00000440934ENST00000449707ENST00000450765ENSG00000273466ENST00000607946CIL_0000AR_0003ENSMUSG00000026135ENSMUST00000027315ENSMUST00000066986ENSMUST00000113737ENSMUST00000127921ENSMUST00000130112ENSMUST00000136865ENSMUST00000156613ENSMUSG00000026173ENSMUST00000027362ENSMUST00000113747ENSMUST00000152707ENSMUSG00000033364ENSMUST00000044260ENSMUST00000188012ENSMUST00000189257
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040684 ENSDART00000059593 N/A N/A N/A 4.266±2.43 N/A N/A 0.652±0.12 0.577±0.10 0.065±0.00 N/A N/A N/A N/A N/A
ENSDART00000141895 N/A N/A N/A N/A N/A N/A 2.016±1.17 2.718±0.43 N/A N/A N/A N/A N/A N/A
ENSDARG00000061373 ENSDART00000087409 N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.00 N/A 0.356±0.00 N/A N/A N/A
ENSDART00000148268 N/A N/A N/A 3.016±0.56 N/A N/A 0.771±0.23 1.032±0.46 0.058±0.00 N/A 0.228±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000074582 ENST00000359273 N/A N/A N/A N/A N/A N/A 7.188±0.00 13.920±0.00 3.139±0.00 N/A N/A N/A 4.704±0.00 N/A
ENST00000392109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000392110 N/A N/A N/A N/A N/A N/A N/A 3.258±0.00 N/A N/A N/A N/A N/A N/A
ENST00000392111 N/A N/A N/A N/A 1.445±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000412366 N/A N/A N/A 1.497±0.00 N/A 3.270±0.00 N/A N/A N/A 3.102±0.00 N/A 9.675±0.00 7.935±1.90 N/A
ENST00000423377 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426649 N/A N/A N/A N/A N/A N/A N/A N/A 4.961±0.00 N/A N/A N/A N/A N/A
ENST00000428880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431802 N/A 3.252±0.00 N/A N/A N/A 1.464±0.43 N/A 0.738±0.00 N/A N/A N/A N/A N/A N/A
ENST00000436603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439945 N/A N/A N/A N/A N/A N/A N/A N/A 2.031±0.00 N/A N/A 18.786±0.00 N/A N/A
ENST00000443791 N/A N/A N/A 10.425±7.53 N/A 3.203±0.00 1.939±0.00 N/A N/A N/A 6.049±0.00 N/A N/A N/A
ENST00000456050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471576 N/A N/A 3.721±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490188 N/A N/A N/A N/A N/A N/A N/A 1.623±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.187±0.00 N/A N/A N/A
ENSG00000115568 ENST00000411696 N/A N/A 0.485±0.00 1.680±0.00 N/A N/A N/A 4.801±0.00 N/A 0.817±0.00 3.405±0.00 N/A N/A N/A
ENST00000432460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000433921 1.787±0.00 1.679±0.00 N/A N/A 4.619±0.00 0.926±0.00 N/A 0.374±0.00 N/A 1.216±0.00 0.416±0.00 3.480±1.03 1.523±0.00 4.317±1.13
ENST00000440934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.913±0.00 N/A N/A N/A
ENST00000449707 1.385±0.00 1.258±0.00 N/A 3.747±0.00 N/A N/A 3.351±0.00 N/A 0.977±0.14 N/A 9.181±0.00 3.542±0.98 1.053±0.02 3.968±0.00
ENST00000450560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450765 N/A N/A N/A N/A 0.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000273466 ENST00000607946 1.547±0.00 5.159±0.00 N/A 1.584±0.00 N/A 4.366±0.00 0.769±0.38 3.944±3.65 0.646±0.00 0.344±0.00 8.617±1.56 2.981±1.91 1.291±0.44 3.670±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026135 ENSMUST00000027315 2.800±1.14 4.660±1.66 1.822±0.48 6.726±2.14 2.721±0.80 2.543±0.57 1.946±0.23 2.211±0.36 1.105±0.38 2.375±0.37 N/A 3.588±1.37 1.934±0.90 N/A
ENSMUST00000066986 N/A N/A N/A N/A N/A N/A N/A N/A 0.443±0.07 N/A N/A 1.392±0.00 0.734±0.28 N/A
ENSMUST00000113737 1.214±0.37 N/A 0.877±0.10 1.154±0.02 1.396±0.33 N/A 0.591±0.10 0.716±0.11 0.385±0.10 1.300±0.38 3.076±0.20 1.353±0.44 0.590±0.11 2.690±0.26
ENSMUST00000127921 2.503±0.88 N/A 2.615±0.34 7.034±2.88 2.812±0.50 2.851±0.37 1.166±0.31 1.643±0.30 0.982±0.47 1.723±0.00 N/A 3.351±1.53 1.953±0.62 N/A
ENSMUST00000130112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 0.581±0.00 N/A
ENSMUST00000136865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.003±0.17 0.929±0.00 N/A
ENSMUST00000147011 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156613 N/A N/A N/A N/A N/A 0.927±0.08 N/A N/A 0.388±0.00 N/A N/A 1.907±0.44 0.819±0.00 N/A
ENSMUSG00000026173 ENSMUST00000027362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.574±9.22
ENSMUST00000067916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113747 N/A N/A N/A 5.158±0.00 6.850±1.51 N/A N/A N/A N/A N/A 28.334±11.33 N/A N/A N/A
ENSMUST00000113749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000113750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.000±1.69
ENSMUST00000185411 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033364 ENSMUST00000044260 1.356±0.00 1.537±0.14 0.607±0.00 3.368±1.22 2.038±0.12 N/A 0.826±0.26 N/A 2.636±1.68 1.774±0.32 0.856±0.39 3.204±0.78 3.344±0.64 1.973±0.00
ENSMUST00000186282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188012 N/A N/A N/A 4.723±0.00 N/A N/A N/A N/A N/A N/A N/A 7.218±0.00 9.098±0.00 26.740±18.07
ENSMUST00000189257 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.243±1.38
ENSMUST00000190592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191058 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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