C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00066C_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000144580-ENSG00000115556 | CGP | 9606 | 2:218568580-218637184  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000144580  (RQCD1)RCD1 required for cell differentiation1 homolog (S. pombe) |
ENST00000273064 (RQCD1-001)
|
218568580-218597080 | protein_coding | |
|
ENST00000295701 (RQCD1-002)
|
218568875-218593845 | protein_coding | ||
|
ENST00000418808 (RQCD1-007)
|
218592316-218594896 | protein_coding | ||
|
ENST00000432877 (RQCD1-004)
|
218568859-218584656 | nonsense_mediated_decay | ||
|
ENST00000433439 (RQCD1-003)
|
218568815-218580724 | nonsense_mediated_decay | ||
|
ENST00000473626 (RQCD1-006)
|
218592304-218593072 | retained_intron | ||
|
ENST00000489687 (RQCD1-005)
|
218568931-218574159 | processed_transcript | ||
|
ENST00000542068 (RQCD1-201)
|
218568708-218596424 | protein_coding | ||
|
ENSG00000207393 (RNU6-136P) RNA, U6 small nuclear 136, pseudogene |
ENST00000384663 (RNU6-136P-201)
|
218589214-218589320 | snRNA | |
|
ENSG00000273466 (RP11-548H3.1) |
ENST00000607946 (RP11-548H3.1-001)
|
218633256-218634014 | antisense | |
| CIL_00066C_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000026174-ENSMUSG00000026173 | CGP | 10090 | 1:74506058-74567794 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000026135 (Zfp142) zinc finger protein 142 |
ENSMUST00000027315 (Zfp142-008)
|
74566426-74588025 | protein_coding | |
|
ENSMUST00000066986 (Zfp142-004)
|
74566502-74588145 | protein_coding | ||
|
ENSMUST00000113737 (Zfp142-001)
|
74565127-74588028 | protein_coding | ||
|
ENSMUST00000127921 (Zfp142-003)
|
74566869-74585663 | nonsense_mediated_decay | ||
|
ENSMUST00000130112 (Zfp142-002)
|
74582232-74587952 | retained_intron | ||
|
ENSMUST00000136865 (Zfp142-006)
|
74582225-74588195 | retained_intron | ||
|
ENSMUST00000147011 (Zfp142-007)
|
74585585-74588133 | processed_transcript | ||
|
ENSMUST00000156613 (Zfp142-005)
|
74566683-74588246 | nonsense_mediated_decay | ||
|
ENSMUSG00000026173 (Plcd4) phospholipase C, delta 4 |
ENSMUST00000027362 (Plcd4-001)
|
74544364-74565977 | protein_coding | |
|
ENSMUST00000067916 (Plcd4-201)
|
74542888-74567794 | protein_coding | ||
|
ENSMUST00000113745 (Plcd4-005)
|
74542903-74560606 | retained_intron | ||
|
ENSMUST00000113747 (Plcd4-004)
|
74542903-74565977 | protein_coding | ||
|
ENSMUST00000113749 (Plcd4-202)
|
74542888-74567794 | protein_coding | ||
|
ENSMUST00000113750 (Plcd4-006)
|
74542903-74565977 | protein_coding | ||
|
ENSMUST00000135111 (Plcd4-007)
|
74564437-74565626 | retained_intron | ||
|
ENSMUST00000141412 (Plcd4-003)
|
74542888-74567794 | nonsense_mediated_decay | ||
|
ENSMUST00000152707 (Plcd4-002)
|
74544364-74565977 | nonsense_mediated_decay | ||
|
ENSMUST00000185411 (Plcd4-008)
|
74544360-74546271 | retained_intron | ||
|
ENSMUST00000189956 (Plcd4-009)
|
74560427-74565301 | processed_transcript | ||
|
ENSMUSG00000026174 (Rqcd1) rcd1 (required for cell differentiation) homolog 1 (S. pombe) |
ENSMUST00000087215 (Rqcd1-001)
|
74506058-74530842 | protein_coding | |
|
ENSMUST00000137100 (Rqcd1-002)
|
74506060-74527087 | processed_transcript | ||
|
ENSMUST00000147810 (Rqcd1-003)
|
74523527-74528177 | retained_intron | ||
|
ENSMUSG00000033364 (Usp37) ubiquitin specific peptidase 37 |
ENSMUST00000044260 (Usp37-002)
|
74435511-74505803 | protein_coding | |
|
ENSMUST00000186282 (Usp37-007)
|
74495718-74505806 | protein_coding | ||
|
ENSMUST00000187590 (Usp37-005)
|
74499956-74506283 | processed_transcript | ||
|
ENSMUST00000188012 (Usp37-004)
|
74439127-74467574 | processed_transcript | ||
|
ENSMUST00000189257 (Usp37-001)
|
74437730-74544284 | protein_coding | ||
|
ENSMUST00000190592 (Usp37-006)
|
74499872-74505791 | retained_intron | ||
|
ENSMUST00000191058 (Usp37-003)
|
74449502-74505785 | retained_intron | ||
Expression Patterns
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