C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 142
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000027315 Zfp142-008 ENSMUSG00000026135 10090 - 1:74566426-74588025 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000027315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000027315 2.800±1.14 4.660±1.66 1.822±0.48 6.726±2.14 2.721±0.80 2.543±0.57 1.946±0.23 2.211±0.36 1.105±0.38 2.375±0.37 3.588±1.37 1.934±0.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066C CIL_00066C_0002 CGP 1:74506058-74567794
CIL_0000AR CIL_0000AR_0003 CGP 1:74542888-74588246
CIL_0000AQ CIL_0000AQ_0003 CGP 1:74565127-74592443

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000411696 ZNF142-201 protein_coding Homo_sapiens 0 2477
ENST00000433921 ZNF142-004 nonsense_mediated_decay Homo_sapiens 0 2630
ENST00000440934 ZNF142-008 protein_coding Homo_sapiens 0 1086
ENST00000449707 ZNF142-001 protein_coding Homo_sapiens 0 2477
ENST00000450765 ZNF142-002 nonsense_mediated_decay Homo_sapiens 0 2630

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